Candidatus Nanopelagicus limnae: B1s21122_05990
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Entry
B1s21122_05990 CDS
T05073
Name
(GenBank) CRP/FNR family transcriptional regulator, anaerobic regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam02020
Two-component system
abam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B1s21122_05990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B1s21122_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
abam03000
]
B1s21122_05990
Transcription factors [BR:
abam03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
B1s21122_05990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
GntR
MarR_2
Crp
HTH_24
Sigma70_r4
HTH_29
TrmB
HTH_Cmi2_C
DUF8035
HTH_ParB
HTH_3
YfeC-like
MarR
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ASY09856
UniProt:
A0A249JZC2
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Position
complement(83561..84250)
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AA seq
229 aa
AA seq
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MPAKNEDEVVRKAPLFSALDDASAASLRASMNGIKISKGQILFKEGDPGDKLFVVVEGKL
KLGTSSGDGRENLLSILGPGDMFGELSLFDPGPRTATATAVVDSKLLALANDQVIGWVTA
HPHVSLQLLKRLSQRLRRANDVLSDLVFADVPGRVAKAIIELGERFGTKKDDGLHVNHEL
TQEELAQLVGASRETVNKALADFASRGWVKLEPRAVIILDYERLVKRGR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaaaaatgaagatgaggtagttagaaaagccccgctttttagtgctttagat
gatgcctccgccgccagtttgcgagcctccatgaatggcataaagatttcaaagggtcag
attttattcaaagagggtgacccaggagataagttatttgttgtagttgagggcaagcta
aagcttggcacatcctctggtgatggcagagaaaaccttttatcaattttaggtccaggg
gatatgtttggtgagttatcactatttgatccaggaccaagaacagcaactgcaacagca
gtcgttgattctaagttactagcccttgcaaatgatcaagtgattggttgggtaaccgcc
catccacatgtttcacttcaacttttaaaaagactgtcacaacgtttaagaagagccaat
gatgttttatctgatttagtctttgctgatgtgcctggccgagttgctaaggcgattatt
gaattaggtgagagatttggaactaaaaaagatgatggcctgcacgttaaccatgagcta
acccaagaggagcttgcccaattagttggggcatctcgagaaactgttaacaaggcgtta
gctgattttgcatcccgtggttgggtaaagcttgaaccacgcgcagtaattattttagat
tatgaaagattagtaaaacggggcagatga
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