Candidatus Nanopelagicus limnae: B1s21122_06020
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Entry
B1s21122_06020 CDS
T05073
Symbol
gmd
Name
(GenBank) GDPmannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00051
Fructose and mannose metabolism
abam00541
Biosynthesis of various nucleotide sugars
abam01100
Metabolic pathways
abam01250
Biosynthesis of nucleotide sugars
Module
abam_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
B1s21122_06020 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
B1s21122_06020 (gmd)
Enzymes [BR:
abam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
B1s21122_06020 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ASY09862
UniProt:
A0A249JZD4
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All DBs
Position
78231..79223
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AA seq
330 aa
AA seq
DB search
MSKKIAFITGITGQDGSYLTEFLLEKGYEVHGLIRRSSSFNTARIDHIYQDPHTPNPKLI
LHYGDLTDGVNMTNLIHQIQPTEVYNLGAQSHVQVSFTMPQYTAQVDAVGAVALLESIRA
SGIKCRYYQASTSELYGSTPPPQNEDSVFRPRSPYAAAKLMAYWSTVNYREAYGVHATNG
ILFNHESPRRGETFVTRKITRAVAKIATGSKDKLYLGNLDAVRDWGYAKEYVESMWLMLQ
QDKPNDYVVATGVGATVKDFAQAAFEHVGLNYKDHVEVDKRYERPTEVDALIGDPSKAEK
VLGWKAKTHWKELAKLMVDADLEKAKSKSN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaagaagattgcatttattaccggtatcaccggacaagatggttcatatctaaca
gagtttctacttgaaaaaggttatgaagtacacggacttattcgccgctctagctctttt
aataccgctcgtatagatcacatctaccaagatcctcacacaccaaatccaaaattgatt
ttgcactatggtgatttaactgatggtgtgaatatgactaatttgattcatcagattcaa
ccaactgaggtgtataacttgggtgcgcaatctcatgttcaagtttcattcactatgcct
caatacacagcccaagttgatgcggtgggcgctgtggcactccttgaatcaattagggca
tctggtattaaatgtcgttactaccaagcaagcacaagtgagctttatggatcaactcct
ccaccgcaaaatgaggattccgtctttagaccaagaagcccatatgcagcagcaaagtta
atggcttattggtcaacagttaattaccgtgaggcgtatggagtgcatgccacaaatgga
attttatttaatcatgaatcacctcgtcgcggtgaaacatttgttactagaaaaataaca
agagctgttgccaagattgccaccggtagtaaagataagttgtaccttggtaatttagac
gctgtgcgtgactggggatatgcgaaagagtatgtcgaatcaatgtggttaatgcttcag
caagataagcccaatgattatgtagttgctaccggggttggcgccactgttaaagatttc
gctcaagcagcctttgaacatgtaggacttaattataaagatcatgttgaagtggataag
cgttatgaaagaccaactgaggttgatgcgttaatcggtgacccatcaaaggctgaaaaa
gtactgggctggaaggcgaaaacacattggaaagagttagcaaagttaatggtggatgct
gatttagaaaaggctaaatcaaaatctaactaa
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