Amycolatopsis bartoniae: AMYBAR_000610
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Entry
AMYBAR_000610 CDS
T10755
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03020
RNA polymerase
Brite
Enzymes [BR:
abar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMYBAR_000610
Transcription machinery [BR:
abar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMYBAR_000610
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMYBAR_000610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XMG31771
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Position
629379..633290
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITGVNTELRHNDLPTLENEIGVERKNIETKRDSDIEARAQKLEAD
LAQLEAEGAKSDVRRKVKEGGEREMRQLRDRAQRELDRLEEIWTTFTKLEPRQLIADEML
YRELYDRYGEYFTGGMGAEAIQKLATEFDVSAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQATGNDPRGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKDMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PAVWDVLEEVITGHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSANNILSPASGRPLAMPRLDMVTGLFHLTRLDENAAGAGH
AYASPAEAIMAFDRKALGLHAPIKIRINDRQPGKADLARLAEAGWEPGQPWLAETTLGRV
LFNELLPADYPFVNEPMPKKRQAAIVNDLAERYSMTQVAQTLDRLKDAGFYWATRSGVTV
SITDVVVPKEKKEILDQYEAKADQVEKRYQRGQLSHAERNNELVKVWSQATDDVAKVMED
AFPEDNPISMIVKSGAAGNMTQVRSLAGMRGLVSNPKGEYIPRPIKANFREGLSVAEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTRRGINMPIGEDLGDGRVV
RAQHVETSAYARTLATDATDAQGNVVLNAGDDLGDPAIEKLLSSGISKVKVRSVLTCESA
VGVCAMCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPR
VTELFEARVPKGKAPIADVDGRVRIEESERFWKITLIPDDGSEEIVFDKLSKRQRLANTP
TGPLADGDHVNVGQPLLEGTPDPHEVLRVMGPREAQIHLVDEVQKVYRAQGVSIHDKHIE
VIVRQMLRRVTIIDSGATDFLPGELPERTKFEATNRQVVAEGGQPASGRPVLMGITKASL
TTDSWLSAASFQETTRVLTDAAINGRSDKLVGLKENVIIGKLIPAGTGINRYRNIQVQPT
EEARVAAYAIPSYDDGYYTPDVFGSGTGAAVPLDDYDFGRDFR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaatttcttcgatgagctccggatcggcctggccaccgcggacgacatc
cgtcagtggtccttcggcgaggtgaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacgcgggccaaggtgcgccgtgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgtgccgtcgcggctgggttacctgctggacctg
gccccgaaggacctcgaaaagatcatctacttcgcggcctacgtgatcaccggcgtgaac
accgagctgcggcacaacgacctgccgacgctcgaaaacgagatcggtgtcgagcgcaag
aacatcgagaccaagcgcgactccgacatcgaggcgcgggcgcagaagctcgaagccgac
ctcgcgcagctcgaggccgagggtgccaagtccgacgtgcgccgcaaggtcaaggagggc
ggcgagcgtgagatgcgccagctccgcgaccgggcccagcgcgagctggaccggctcgag
gagatctggaccaccttcaccaagctcgaaccgcggcagctgatcgcggacgagatgctc
taccgcgagctgtacgaccgctacggcgagtacttcaccggcggcatgggcgcggaggcc
atccagaagctggccaccgagttcgacgtcagcgcggaggccgagaacctgcgcgagacc
atccgcagcggcaaggggcagaagaagctccgcgcgctcaagcggctcaaggtcgtcgcg
gcgttccaggccaccggcaacgacccgcgcggcatggtgctcgacgccgtcccggtgatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacctcggacctg
aacgacctgtaccgccgggtcatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccgggccgggcaaccggccgctgaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggacatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagtccgcgaagcggatggtcgagcgggcccgc
ccggccgtgtgggacgtgctggaagaggtcatcaccgggcacccggtgctgctcaaccgc
gcgccgacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgcggacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctg
tcggcgaacaacatcctgtcgccggcgtcgggccgtccgctcgccatgccgcgtctggac
atggtcacgggtctgttccacctgacccgactggacgagaacgcggccggtgccgggcac
gcctacgcgtcgccggccgaggccatcatggccttcgaccgcaaggcgctgggcctgcac
gcgccgatcaagatccggatcaacgaccggcagccgggcaaggccgacctggccaggctc
gccgaggccggctgggagccgggtcagccgtggctggccgagaccacgctgggccgggtg
ctgttcaacgagctgctgcccgcggactacccgttcgtgaacgagccgatgccgaagaag
cggcaggccgcgatcgtgaacgacctcgccgagcggtactcgatgacgcaggtcgcgcag
accctcgaccggctcaaggacgccggcttctactgggcgacgcggtccggcgtcaccgtg
tcgatcaccgacgtggtcgtgcccaaggagaagaaggagatcctcgaccagtacgaggcc
aaggccgaccaggtcgagaagcgctaccagcgcggtcagctctcgcacgccgagcgcaac
aacgagctggtcaaggtgtggagccaggcgaccgacgacgtcgccaaggtcatggaggac
gccttcccggaggacaacccgatctcgatgatcgtgaagtccggtgcggcgggcaacatg
acccaggtccgttcgctggccggtatgcgtggtctggtgtcgaacccgaagggtgagtac
atcccgcgtccgatcaaggcgaacttccgcgagggcctgtcggtggccgagtacttcatc
gccacccacggtgcccggaagggtctggccgacaccgcgctgcggaccgccgactcgggt
tacctgacccggcgtctggtggacgtgtcgcaggacgtcatcgtccgcgagaccgactgc
ggtacccgccgcggcatcaacatgccgatcggcgaggacctcggtgacgggcgggtcgtg
cgtgcccagcacgtcgagaccagcgcgtacgcgcggactctcgccacggacgccacggac
gcccagggcaacgtggtgctcaacgcgggtgacgacctcggtgacccggccatcgagaag
ctgctctccagcggcatctcgaaggtcaaggtgcgcagcgtgctgacctgtgagtcggcc
gtgggtgtgtgtgcgatgtgctacggccgttcgatggccaccggcaagctggtggacgtg
ggcgaggccgtcggtatcgtcgccgcccagtcgatcggtgagccgggtacccagctgacg
atgcgtaccttccaccagggtggtgtcgccggtgacgacatcaccacgggtctgccgcgt
gtcaccgagctgttcgaggcccgcgtgccgaagggcaaggcgccgatcgccgacgtcgac
ggccgcgtgcggatcgaggagagcgagcggttctggaagatcacgctgatcccggacgac
ggcagcgaggagatcgtcttcgacaagctgtcgaagcggcagcgcctggccaacacgccg
accgggccgctggcggacggtgaccacgtcaacgtcggtcagccgctgctcgaaggcacg
ccggacccgcacgaggtcctgcgcgtcatggggccgcgtgaggcgcagatccacctggtg
gacgaggtccagaaggtgtaccgcgcgcagggtgtgtcgatccacgacaagcacatcgag
gtcatcgtccggcagatgctgcgccgggtgacgatcatcgactccggtgccacggacttc
ctgccgggcgagctgcccgagcggaccaagttcgaggcgaccaaccggcaggtcgtggcc
gagggcgggcagccggcctcgggccgtccggtgctgatgggcatcacgaaggcgtcgttg
accacggactcgtggctgtcggcggcgtcgttccaggagaccacgcgagtcctgaccgat
gcggcgatcaacggccgcagcgacaagctcgtgggcctcaaggagaacgtgatcatcggt
aagctgatcccggccggtacgggcatcaaccgctaccgcaacatccaggtgcagccgacg
gaggaggcccgggtggcggcgtacgccatcccgtcctacgacgacggctactacaccccg
gatgtgttcggcagcggcacgggtgccgccgtcccgctggacgactacgacttcggtcgc
gacttccgctga
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