Amycolatopsis bartoniae: AMYBAR_000655
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Entry
AMYBAR_000655 CDS
T10755
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMYBAR_000655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abar03021
]
AMYBAR_000655
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_000655
Enzymes [BR:
abar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMYBAR_000655
Transcription machinery [BR:
abar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMYBAR_000655
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMYBAR_000655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XMG31816
LinkDB
All DBs
Position
660110..661177
Genome browser
AA seq
355 aa
AA seq
DB search
MLISQRPALGEEPINETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHN
PDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKLK
LVGLGLSLKDSPPGFDPTAAAASYDGEGWSSPESVDGISDAGHDDGQDYAETEQL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatttcacagcgaccggccctcggcgaggagccgatcaacgagacccggtcccgg
ttcaccatcgaaccgctggagccgggcttcggttacaccctcggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggcggtcacgagcatccgcatcgacggggtgctg
cacgagttcaccaccgtcccgggggtgaaggaagacgtcaccgacatcatcctgaacctc
aaggagctggtcgtctcgtccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggcgaggtcaccgcggcggacatcgtgccgccggcgggggtcaccgtgcacaac
cccgatctgcacatcgcctcgctgaacggcaagggcaagctggagatcgagctggtcgtc
gagcgcggccgcggctacgtgcccgccctgcagaacaagcaggccggcgcggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagaccaagccg
tcgatcacgccccgggacgcggtcgcgtcggccggcaagacgctggtggagctgttcggt
ctcgcccgcgagctgaacgtcgacgcggagggcatcgagatcggcccgtcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctggacctcaccgtccggtcg
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctggtctcgcgcagcgag
gcggacctgctggacatccgcaacttcggtgccaagtcgatcgacgaggtcaagctgaag
ctggtcggtctgggcctgtcgctcaaggacagcccgcccgggttcgacccgacggccgcc
gccgccagctacgacggtgagggctggtcctcgccggagagtgtcgacggcatttcggac
gctggccacgacgacggccaggactacgcagagacggagcagctgtag
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