Amycolatopsis bartoniae: AMYBAR_000905
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Entry
AMYBAR_000905 CDS
T10755
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
abar Amycolatopsis bartoniae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
XMG32062
LinkDB
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Position
complement(928351..930558)
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AA seq
735 aa
AA seq
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MSTVPAGFDEKSDAELISSVRGGELAAYGTLYERHVGAAYNLARQLARSKAESDDLVSEA
FAKVLDTLRAGKGPDSAFRAYLLTALRHTAYDRTRKEKRLDLNEDMTTLSGAGGAATDAL
TVPFSDTAVAGLERTMAAKAFARLPERWQAVLWHTEIEGQTPAEVAPLLGLTANGVSALA
YRAREGLRQAYLQVHLAETSAERCRATADRLGAWTRDGLSKRERAQVEAHLDECDRCRAL
AAELADVNGALRAVVAPIVLGGAVFGYLAATGAKASAVTVTAAAASAGSAGGAAGAAAAG
PRQFLGVAASGVGIAAAVAVALAAGGGSQEIPAAASLPAPPPAVVAPAPAPVPAPAPPAS
PAPAPAPAPQPVPAPPAPAVVPAPAPVAPPPPPPAAPANLTTQSPVEGVELEPGSGTPIA
LPITVRNDGGTVSDPVTATLNLPQGIRAVGPGGGGGAPGARGFAVQTSQGPLNVDCPAGT
GTVTCSTDRGLQPGETATLTFRLLADQDAQPGEVTGSVTAGRTIRLAVRVPVAVKQQPDV
VDLAVLPSWDVPWPWLHPRVFTVDVANEGPNTKPVTVALDRPARLLTGFADCTSDGDGTS
CTSTAPLAPHQHLLLTFKLDGHPFDVESVTVTATLGTATKTATVQSSCWPGLPCDPDDDP
VPSGLLPTSSTTTTTTGTSSSSSSSSSRPSAPAVTTTTTPESSTTTTTTTSSSSSSSTTK
TKPPRPWWWLPWLPW
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgttcccgcgggtttcgacgagaagagcgacgccgagctgatctcctcggtc
cggggtggcgagctggccgcgtacggcacgctctacgagcgccacgtcggggccgcctac
aacctcgcccgccagctggcccggtcgaaggccgagtccgacgacctggtgtccgaggcg
ttcgccaaggtcctcgacacgctccgcgccggcaaggggcccgacagcgccttccgcgcg
tacctgctcaccgccctccgccacaccgcgtacgaccgcacgcgtaaggagaaacgactc
gacctcaacgaggacatgaccacgttgagcggggcgggcggcgccgcgacggacgcgctc
accgtcccgttctccgacaccgccgtcgccgggctcgaacgcaccatggccgcgaaggcg
ttcgcgcggctgccggaacgctggcaggccgtgctgtggcacaccgagatcgagggccag
acgcccgccgaggtcgcgcccctgctggggctgacggcgaacggcgtgtccgcgctcgcc
taccgcgcccgcgaggggctgcggcaggcgtacctgcaggtccacctcgccgagacgtcc
gcggagcgctgccgcgccaccgccgaccggctcggcgcgtggacgcgggacggactgtcc
aaacgcgagcgcgcccaggtcgaggcccacctcgacgagtgcgaccggtgccgtgcgctg
gccgccgagctggccgacgtcaacggcgcgttgcgggccgtggtcgcgccgatcgtgctg
ggtggcgcggtcttcgggtacctcgcggcgaccggcgcgaaggcgagcgccgtcacggtc
accgccgcggcggcttcggccggttccgcgggcggtgcggcgggagccgcggccgccggg
ccgcgccagttcctcggcgtcgccgcgtcgggggtcggcatcgcggccgccgtcgccgtc
gcgctcgccgcgggcgggggctcgcaggaaattccggccgccgcttcgctgccggctccg
ccgcccgcggtcgtcgcgcccgcacccgctccggttccggccccggcgccaccagcgtca
ccggctcccgctccggctccagcgccccagccggtgcccgctccgcccgcgcccgcggtc
gttcccgcgcccgcgccggtcgccccgccaccgccgccgccggccgcgcccgcgaacctc
accacgcagtcgcccgtggaaggtgtcgagctggagcccggttcgggcacgcccatcgca
ctgccgatcaccgtccgcaacgacggtggcacggtctccgatccggtcaccgccacgctg
aacctgccccagggcatccgcgcggtcggccccggcggcggaggcggcgctccgggcgcg
cgcgggttcgccgtgcagacgagccagggcccgctgaacgtcgactgccccgccggtacc
ggcacggtcacgtgctcgaccgaccgcggactgcaacccggcgagaccgcgacgctcacg
ttccggctgctggccgaccaggacgcgcaacccggtgaggtgacggggtcggtcaccgcg
ggccgcacgatccggctggcggtccgggtccccgtcgcggtgaagcagcagcccgacgtc
gtggacctggccgtgctgccgtcgtgggacgtgccgtggccgtggctgcacccgcgggtg
ttcacggtcgacgtcgccaacgaggggccgaacaccaagcccgtcaccgtcgcgctggac
cggccggcgcggctgctcacgggattcgccgactgcacctcggacggcgacgggaccagc
tgcacgagcacggcgccgctcgcgccgcaccagcacctgctgctgacgttcaagctcgac
gggcacccgttcgacgtcgagtccgtcacggtcaccgcgacgctgggcacggcgacgaag
accgcgacggtgcagtcctcctgctggcccggcctgccgtgcgacccggacgacgacccg
gtgccgagcgggctgctgccgacttcgagcaccaccaccacgacgacgggcacttcgtcc
tcgtcgagcagcagttcttcgcggccctcggcacccgcggtgaccacgacgaccaccccg
gagtccagcaccacgacgaccacgacgacctcgtcgagcagctcgtccagcaccacgaag
accaagcccccgaggccgtggtggtggctgccgtggctgccctggtga
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