Amycolatopsis bartoniae: AMYBAR_001107
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Entry
AMYBAR_001107 CDS
T10755
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03420
Nucleotide excision repair
abar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMYBAR_001107
03430 Mismatch repair
AMYBAR_001107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_001107
Enzymes [BR:
abar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMYBAR_001107
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMYBAR_001107
MMR (mismatch excision repair)
Other MMR factors
AMYBAR_001107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XMG32258
LinkDB
All DBs
Position
1135196..1137274
Genome browser
AA seq
692 aa
AA seq
DB search
MVDAPPRTNRPGLLDGLDPEQRAAAVAPRGPVCVLAGAGTGKTRTITHRIAHLISSGHVA
PGQVLAVTFTTRAAGEMRTRLRALGVEGAQALTFHAAARRQLRYFWPRVVGDRLWDLLEG
KLRLVGQAAQRAGLGTDAELLRDLASEIEWAKASLISPDDYPATAVRVQRDSPAAPQQVA
EVYRAYEKLKNSAQVLDFDDLLLHTTAVLEENAEVAREFRDRYRCFIVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRFPEATVVRLERDYRSTPQVVE
LANKVIGAARNRPAGSRLRLVGQRPPGPEPRFAEFEDEPTEAAAVAARVRTLLDAGVAAS
EIAILYRINAQSEGYEQALAQVGVPYLVRGGERFFDRREVRQAMVSLRTAAADPPPTELV
TAVRSVLSRVGLTDQPPAGGAAKERWDALLSLVEVAEELAATVEGADLPRYVAELEQRAS
AQHPPTVEGVTLASLHAAKGLEWDAVFLVGLSEGTMPILHADGDDNAIEEERRLFYVGVT
RAREHLWLSWSLSRHPGGRRNRRRSRFLYGLLPEQHPAARVPRAQAGKSGPKPRCRLCDR
PLLDTMEIKLGRCRRCPSNVDIELFERLKEWRQERAKELKVPPFVVFTDATLLAIAEQQP
VDRGGLVSISGIGPGKVTKYGDDVLAVIQGER
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgcacctcctcgcacgaacaggccgggcctgctggacgggctcgaccccgaa
caacgcgccgccgccgtcgccccgcgggggccggtgtgcgtgctcgcgggcgcgggcacg
gggaagacgcgcacgatcacgcatcgcatcgcgcacctgatcagctcgggtcacgtcgcg
ccgggacaggtgctcgcggtcaccttcaccacgcgggcggcgggggagatgcgcacccgg
ctgcgggcgctcggcgtggagggcgcgcaggcgctcacgttccacgcggcggcccggcgg
cagctgcggtacttctggccgcgggtggtcggggacaggctgtgggacctgctcgaaggc
aagctgcgcctggtggggcaggccgcgcagcgcgccgggctgggcaccgacgcggagctg
ctgcgggacctggcgagcgagatcgagtgggccaaggcttcgctcatcagcccggacgac
tatccggcaacggccgtgcgggtgcagcgggacagcccggcggcgccgcagcaggtcgcc
gaggtctaccgggcgtacgagaagctgaagaactccgcgcaggtcctcgacttcgacgac
ctcctgctgcacaccacggcggtgctggaggagaacgcggaggtcgcccgcgagttccgc
gaccggtaccgctgcttcatcgtcgacgagtaccaggacgtcaccccgctgcagcagcgc
ctgctcgacgcgtggctcggcgggcgggacgacctgacggtggtcggcgacgcgaaccag
acgatctactcgttcggcggcgcctccccgcgcccgctgctggagttcacccggcgcttc
cccgaggcgacggtggtgcggctcgaacgcgactaccgctcgacgccgcaggtggtggag
ctggccaacaaggtgatcggtgcggcgcgcaaccgcccggcgggctcgcggctgcggctg
gtcgggcagcggccgccggggccggagccgaggttcgcggagttcgaggacgagcccacc
gaggcggcggccgtcgcggcccgtgtgcgcacgctgctcgacgccggggtggccgcgagc
gagatcgcgatcctgtaccggatcaacgcgcagtcggaggggtacgagcaggcgctggcc
caggtgggggtcccgtacctggtacggggcggggagcggttcttcgaccggcgcgaggtg
cgccaggcgatggtctcgctgcgcacggcggctgccgatccgccgccgaccgagctggtc
accgccgtccggtcggtgctctcgcgggtggggctgacggaccagccgccggccggtggc
gcggcgaaggagcggtgggacgcgctgctgtcgctggtcgaggtcgcggaggagctcgcc
gccacggtcgagggcgcggacctgccgcggtacgtggccgagctggagcagcgcgcgtcg
gcccagcacccgccgacggtcgagggcgtcacgctggcgtcgctgcacgcggcgaagggc
ctggagtgggacgcggtgttcctcgtcgggttgtccgagggcaccatgccgatcctgcac
gcggacggggacgacaacgcgatcgaggaggagcggcggctgttctacgtcggcgtcacg
cgggcgcgcgagcacctgtggctgtcgtggtcgttgtcgcggcacccgggcgggcggcgc
aaccgccgccgcagccgtttcctgtacgggttgttgccggagcaacacccggcggcgcgg
gttccgcgtgcgcaggcgggcaagagcgggccgaagccgcggtgccggttgtgcgaccgg
ccgctgctggacacgatggagatcaagctcggccgctgccgacggtgtccgtccaatgtg
gacatcgagctgttcgagcggctgaaggaatggcgccaggagcgggcgaaagagctgaag
gtgccgccgttcgtggtgttcaccgacgcgacgctgctcgcgatcgccgagcagcagccg
gtggaccgcggcgggctggtgtcgatctccgggatcgggccgggcaaggtgacgaagtac
ggcgatgacgtcctcgccgtcatccagggtgagcgttga
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