Amycolatopsis bartoniae: AMYBAR_001296
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Entry
AMYBAR_001296 CDS
T10755
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar00300
Lysine biosynthesis
abar00470
D-Amino acid metabolism
abar01100
Metabolic pathways
abar01110
Biosynthesis of secondary metabolites
abar01120
Microbial metabolism in diverse environments
abar01230
Biosynthesis of amino acids
Module
abar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMYBAR_001296 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMYBAR_001296 (lysA)
Enzymes [BR:
abar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AMYBAR_001296 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XMG32439
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All DBs
Position
1336602..1338035
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AA seq
477 aa
AA seq
DB search
MAHPAGPRHADVRPHADNAGFPPTTAEEFDRLYPKVWPRNTYRAPDGVVRIAGVDVRELA
ETYGTPLFVVDEADFKARCAEYAEAFDDPSLVHYAGKAFLCTEVARWVAAQGLSLDVASG
GELAIALHAGFPAERITFHGNNKSMDELESAVAAGVGTVVLDSFYEIARLGDVAARHEVV
QNVLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAPSLRLIGLHSHIG
SQIFDSDGFEVAARRVVGLLAELRKEHGDELIQQLSVVDLGGGFGIAYTDRDNPPPPAQM
VTQIREIVRKECEFAGLPVPRIAGEPGRAIAGPGTITLYEVGTIKDVSLGDNLSRRYVSV
DGGMSDNIRTALYDAVYDCRLVSRSADEGDGEVGAALSRVVGKHCESGDIVVRDCWLPDS
LAPGDLLALAATGAYCYSMASNYNRQPRPAVVAVRNGSARLLLRRETVEDMLNLEVS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccccgcaggaccgcgccacgccgacgtgcgcccgcacgccgacaacgcgggc
tttccccccaccacggccgaggagttcgaccggctgtacccgaaggtgtggccccgcaac
acctatcgcgccccggacggtgtcgtgcgcatcgccggtgtcgacgtgcgcgagctcgcc
gagacgtacggcacgccgctgttcgtggtggacgaggccgacttcaaggcgcgctgcgcg
gagtacgccgaggcgttcgacgacccgtcgctcgtgcactacgcgggcaaggcgttcctg
tgcacggaggtcgcccgctgggtcgccgcgcaggggctgagcctcgacgtcgccagcggc
ggcgagctcgccatcgcgctgcacgccgggttccccgccgagcggatcaccttccacggc
aacaacaagtcgatggacgagctcgaaagcgcggtggccgccggggtcggcacggtggtg
ctcgactcgttctacgagatcgcccggctcggcgacgtggcggcccgccacgaggtcgtg
cagaacgtcctcgtgcgcgtcaccgtcggcgtcgaggcgcacacgcacgagttcatcgcg
accgcccacgaggaccagaagttcggtttctcgctggcttccggtgacgccgccgaggcc
gtgcgccgggtgctcaacgccccgtcgctgcggctgatcggcctgcacagccacatcggc
tcgcagatcttcgactccgacgggttcgaggtcgccgcgcgccgcgtggtcgggctgctc
gccgagctgcgcaaggaacacggcgacgagctgatccagcaactgtccgttgtggacctc
ggtggcggtttcggcatcgcgtacaccgatcgggacaacccgccgccgcccgcgcagatg
gtcacgcagatccgcgagatcgtccgcaaggagtgcgagttcgccgggctgccggtgccg
cgcatcgcgggcgagccgggccgcgcgatcgccggtcccggcacgatcacgctgtacgag
gtgggcacgatcaaggacgtctcgctcggcgacaacctcagtcgccggtacgtgagcgtc
gacggcgggatgagcgacaacatccgcacggcgctctacgacgcggtgtacgactgccgc
ctggtgtcgcgctcggccgacgagggcgacggcgaggtgggcgccgcgctgtcccgcgtg
gtgggcaagcactgcgagtccggcgacatcgtggtgcgcgactgctggctgccggactcg
ctcgcccccggtgacctgctcgcgctggccgccacgggcgcgtactgctactcgatggcc
agcaactacaaccggcagccgcgccccgcggtggtcgcggtccgcaacggcagcgcgcgg
ctgctgctgcgccgcgagaccgtcgaggacatgctgaacctggaggtgtcgtga
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