Amycolatopsis bartoniae: AMYBAR_001601
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Entry
AMYBAR_001601 CDS
T10755
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar02024
Quorum sensing
abar03060
Protein export
abar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AMYBAR_001601 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AMYBAR_001601 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMYBAR_001601 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
abar02044
]
AMYBAR_001601 (ffh)
Enzymes [BR:
abar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AMYBAR_001601 (ffh)
Secretion system [BR:
abar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AMYBAR_001601 (ffh)
Eukaryotic Sec-SRP protein
AMYBAR_001601 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
TctA
APS_kinase
Zeta_toxin
AAA_31
ArsA_ATPase
AAA_18
AAA_33
AAA_24
NPHP3_N
NACHT
MobB
Lyase_catalyt
AAA_16
6PF2K
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
XMG32741
LinkDB
All DBs
Position
1649576..1651102
Genome browser
AA seq
508 aa
AA seq
DB search
MFDTLSDRLTAALQTLRGKGKLTDADIDATAREIRIALLEADVALPVVREFIAQVKQRAK
GAEVSGALNPAQQVVKIVNEELVAILGGETRRLSLAKNPPTVIMLAGLQGSGKTTLAGKL
SLWLKKQGHAPLLVACDLQRPNAVTQLQVVGERAGVPTFAPEPGNGVGDPVDVARRGVAE
AKRAQHDVVIVDTAGRLGVDEELMKQAADIRDAVQPDETLFVVDAMIGQDAVNTAEAFRD
GVGFSGVVLTKLDGDARGGAALSVRQVTGQPILFASNGEKLEDFDTFHPDRMASRILGMG
DVLTLIEQAEQAFDQEQAEKAAAKLGTGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKQLDRVQAIIRGMTPAERADPKIINGSRRQRIAVGSGVTVREVNDLVNRF
FEARKMMQQMAGRFGFGGGSATKRKNKKGKKGKGKGPTQPKVRGGFPGGMPMLPPGGGGG
MPDLSQLGGSMNDVPGFDPSKFKLPKNK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgaccggctcaccgccgccctgcagacactgcggggcaagggg
aagctgaccgacgccgacatcgacgccaccgcgcgcgagatccgtatcgcgctgctggag
gccgacgtcgcgctgcccgtcgtgcgggagttcatcgcgcaggtgaagcagcgcgccaag
ggcgccgaggtctcgggcgcgctcaacccggcgcagcaggtcgtcaagatcgtcaacgag
gagctcgtcgcgatcctcggcggcgagacgcggcggctcagcctggccaagaacccgccg
acggtgatcatgctcgccggtctgcagggttccggtaagacgacgctcgcgggcaagctc
tcgctgtggctgaagaagcagggccacgcgccgctgctcgtggcctgtgacctgcagcgc
ccgaacgccgtcacccagctccaggtggtcggcgagcgggctggcgtgcccaccttcgca
ccggagccgggcaacggcgtcggcgacccggtggacgtggcgcgccgcggtgtcgccgag
gccaagcgcgcgcagcacgacgtcgtcatcgtcgacaccgccggccggctgggcgtcgac
gaggagctgatgaagcaggccgcggacatccgcgacgcggtccagccggacgagacgctg
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacacggccgaggcgttccgcgac
ggcgtcgggttcagcggcgtggtgctcaccaagctcgacggtgacgcccgcggtggtgcc
gccctgtcggtgcggcaggtcaccgggcagccgatcctgttcgcctccaacggcgagaag
ctcgaagacttcgacaccttccacccggaccggatggccagccggattctgggcatgggt
gacgtgctcaccctgatcgagcaggccgagcaggcgttcgaccaggagcaggcggagaag
gccgcggcgaagctcggcaccggccagctgacgctggaggacttcctcgagcagatgctc
gcggtgcgcaagatgggcccgatcggcaacctgctcggcatgctgcccggcgcgggccag
atgaaggaccagctggcgcaggtcgacgacaagcagctggaccgggtgcaggcgatcatc
cgcggcatgaccccggcggagcgcgccgacccgaagatcatcaacggttcgcggcggcag
cgcatcgccgtcggttcgggggtgaccgtgcgcgaggtcaacgacctcgtgaaccggttc
ttcgaggcccgcaagatgatgcagcagatggcgggccggttcggcttcggcggcggcagc
gccaccaagcgcaagaacaagaaggggaagaagggcaagggcaagggcccgacgcagccc
aaggtgcgcggcggcttccccggtggcatgccgatgctgccgcccggtggcggcggcggg
atgcccgacctgtcccagctgggcggcagcatgaacgacgtacccggtttcgacccgtcg
aagttcaagctgcccaagaacaagtga
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