Amycolatopsis bartoniae: AMYBAR_002039
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Entry
AMYBAR_002039 CDS
T10755
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abar Amycolatopsis bartoniae
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abar03016
]
AMYBAR_002039 (truB)
Enzymes [BR:
abar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMYBAR_002039 (truB)
Transfer RNA biogenesis [BR:
abar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMYBAR_002039 (truB)
Prokaryotic type
AMYBAR_002039 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XMG33172
LinkDB
All DBs
Position
2102494..2103390
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AA seq
298 aa
AA seq
DB search
MPPKSPPPPPGLLVVDKPPGMTSHDVVARVRRIMGTRKVGHAGTLDPMATGVLVLGVERA
TKLLGHLALDRKTYLATLSLGSATTTDDAEGEVLSTADSLEAVTDERIAAGIAGLTGEIE
QVPSAVSAVKVAGKRAYARVRAGEDVALPPRKVTVYRFDLLATRHGADRVELDAVVECSS
GTYVRALARDLGAGLGVGGHLAALRRTTVGPFTLASARTLEQLEERPALSHDLSEAVAKA
FPRHDVDAATAKAVQHGQQVRAAGIEGTYGVFGPDGRALALAVDAGGVARSVVVLEPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgaagtccccaccgccaccgcccggtctgctcgtcgtcgacaagccgccgggc
atgacctcgcacgacgtcgtcgcccgggtgcgccgcatcatgggcacccgcaaggtcggc
cacgccggcacgctcgacccgatggccaccggcgtgctcgtgctgggcgtcgagcgggcc
acgaagctgctcggccacctggcgctggaccgcaagacgtacctggccacgctgtcgctg
ggctcggccaccaccaccgacgacgccgagggcgaggtcctgtccacagcggactcgctg
gaggcggtcaccgacgagcggatcgcggccgggatcgccgggctgaccggcgagatcgaa
caggtgcccagcgcggtgagcgcggtgaaggtggcgggcaagcgcgcctacgcccgcgtc
cgggccggggaggacgtcgcgctgccgccgcgcaaggtgacggtctaccggttcgacctg
ctcgccacgcgccacggggccgaccgcgtcgagctggacgccgtcgtcgagtgctcctcc
ggcacgtacgtccgggcgctcgcccgggacctaggcgcggggctcggcgtcggcggacac
ctcgccgcgctgcgccgcaccacagtcggcccgttcaccctcgcctcggcgcggaccctg
gagcagctggaggagcggcccgcgttgtcgcacgacctgagcgaggccgtcgcgaaggcg
ttcccgcgccacgacgtggacgccgcgaccgcgaaggccgtccaacatggacagcaggtg
cgcgcggcggggatcgagggcacctacggcgtcttcggccccgacggccgggcgctcgca
ctggccgtcgacgccggcggcgtggcccggtcggtcgtggttctcgaacccgcctaa
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