KEGG   Amycolatopsis bartoniae: AMYBAR_002063
Entry
AMYBAR_002063     CDS       T10755                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
abar  Amycolatopsis bartoniae
Pathway
abar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMYBAR_002063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abar03019]
    AMYBAR_002063
Messenger RNA biogenesis [BR:abar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AMYBAR_002063
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: XMG33195
LinkDB
Position
2124120..2125754
AA seq 544 aa
MRVVALGGIGEVGRNMTVFEHAGRLLIVDCGVLFPEDAQPGVDLILPDFRAIEDRLDEID
ALVLTHGHEDHIGAVPFLLRLRPDLPVYGSRFTLALLDAKCREHRQRPKLIEVTESERRT
VGPFELEFFAVNHSIPDALAVAIRTPAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEG
VDLLCIDSTNAEVPGFVTPERDIGPVLDDVIGKVTQRVIVACFASHVHRVQQVLDAAVRH
RKRVAFVGRSMVRNMGIAADLGLLNIPDGLLIDLDQAVNLPETQVLFVSTGSQGEPLSAL
SRMARGEHRQISIRAGDTVVLASSLIPGNETAVFGVVNGLVRLGAHVVHQGNAKVHVSGH
ASAGELLFLYNAIRPSNVMPVHGEWRHLRANAALAVRTGVAPENVVLAEDGVVVDLVDGQ
ARTTGRVEVGHVYVDGLSVGDVGESTLSDRLVLGEGGFIAITVAVDSATGRAVSTPTVSG
RGFSDDPKALDAVVPLVEMELSRTEAEGITDSHRIAQAVRRTVGRWVADTYRRRPMIVPT
VIPV
NT seq 1635 nt   +upstreamnt  +downstreamnt
ctgcgcgtcgtcgcgctcggcggcatcggcgaggtcggccgcaacatgaccgtcttcgag
cacgccgggcggctgctcatcgtcgactgcggggtgctgttccccgaggacgcgcagccc
ggtgtggacctgatcctgcccgacttccgggcgatcgaggaccggctcgacgagatcgac
gcgctcgtgctcacccacgggcacgaggaccacatcggcgcggtgccgttcctgctgcgc
ctgcgcccggacctgccggtgtacggctcccgcttcacgctcgccctgctcgacgcgaag
tgccgcgagcaccggcagcggccgaagctgatcgaggtgaccgagtccgagcggcgcacg
gtcggcccgttcgagctcgagttcttcgccgtcaaccactccatcccggacgcgctcgcg
gtcgcgatccgcacgccggcgggcgtggtgctgcacaccggtgacatcaagctggaccag
ctgccgctcgacgggcggctgaccgacctggcgggcttctcgcggctcggcgacgagggc
gtcgacctgctgtgcatcgactcgaccaacgccgaggtgcccgggttcgtcacgccggag
cgtgacatcggcccggtgctcgacgacgtgatcggcaaggtcacccagcgcgtgatcgtg
gcgtgcttcgccagccacgtgcaccgcgtgcagcaggtgctcgacgcggcggtgcggcac
cgcaagcgggtcgcgttcgtgggccgctcgatggtgcgcaacatgggcatcgccgcggac
ctggggctgctgaacatcccggacggcctgctgatcgacctggaccaggcggtgaacctg
ccggagacgcaggtgctgttcgtgtccacgggttcgcagggcgagccgctgtcggccctc
tcgcgcatggcgcgcggcgagcaccggcagatctcgatccgcgccggcgacaccgtcgtg
ctggccagctcgctgatcccgggcaacgagaccgccgtgttcggcgtcgtcaacggcctg
gtgcgcctcggcgcgcacgtggtgcaccagggcaacgcgaaggtgcacgtgtccgggcac
gcgtcggcgggcgagttgctgttcctgtacaacgcgatccgccctagcaacgtcatgccg
gtgcacggcgagtggcggcacctgcgggcgaacgcggcgctggccgtgcgcaccggggtg
gcgccggagaacgtggtgctcgccgaggacggcgtggtcgtggacctcgtcgacgggcag
gcgcgcacgaccggccgggtcgaggtcgggcacgtgtacgtggacgggctgtcggtcggc
gacgtgggcgagtcgacgctgtcggaccggctggtgctgggcgagggcgggttcatcgcg
atcaccgtcgccgtggactcggcgaccggccgcgcggtgagcaccccgacggtgtcgggg
cgcgggttctccgacgatccgaaggcgctcgacgcggtcgtgccactggtggagatggag
ctgtcacgcaccgaggccgagggcatcaccgacagtcaccgcatcgcgcaggcggtgcgg
cgcacggtgggccgctgggtcgccgacacctaccgccgccggccgatgatcgtgcccacc
gtcatccccgtgtga

DBGET integrated database retrieval system