Amycolatopsis bartoniae: AMYBAR_002144
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Entry
AMYBAR_002144 CDS
T10755
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
abar Amycolatopsis bartoniae
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abar03021
]
AMYBAR_002144
Transcription machinery [BR:
abar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMYBAR_002144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_3
MarR_2
HTH_Crp_2
HTH_23
MarR
HTH_24
Sigma70_ECF
HTH_31
HTH_ParB
KORA
GerE
HTH_26
HTH_7
Motif
Other DBs
NCBI-ProteinID:
XMG33275
LinkDB
All DBs
Position
complement(2211761..2212516)
Genome browser
AA seq
251 aa
AA seq
DB search
MTEDEKVSLFKQLAATDPADPRRETLRTALVTEYLSVAEHIARRFSGRGEAYDDLVQVAR
VGLINAVDRFEPERGSDFLSFAVPTIMGEVRRHFRDASWSVRVPRRLKELHLQIGQVSGE
LGQRLGRAPTPTEIARALDLTVDEVSEGLQAGNAYYAISVDKPAGEESESASLADTLGEE
DNGLQSVENHEALQPLLRDLPERERTILMLRFFGNMTQTQIAKRVGISQMHVSRLLAQTL
QHLREKLTDEP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgaggacgagaaggtctcgctgttcaagcagctggcggccaccgaccccgcggac
ccgcgccgcgagaccctgcgcaccgcgctggtcacggagtacctgtcggtcgccgagcac
atcgcccgccgcttcagcggccgcggcgaggcctacgacgacctggtgcaggtcgcgcgc
gtgggcctgatcaacgcggtggaccggttcgaacccgagcgcggcagcgacttcctgtcg
ttcgcggtgcccaccatcatgggcgaggtccgccgccacttccgcgacgcgagctggtcg
gtccgcgtaccccggcggctcaaggagctgcacctgcagatcggccaggtcagcggcgag
ctgggccagcgcctcggccgcgcgcccacgccgacggagatcgcccgcgcgctggacctc
acggtcgacgaggtgagcgagggtctgcaggccggaaacgcctactacgccatctccgtg
gacaagcccgccggagaggaaagcgaatccgcttcgctcgcggacaccctgggcgaagag
gacaacggtctccagtcggtcgagaaccacgaggcgctgcaaccacttctgcgtgacctg
cccgagcgcgagcgcacgatcctgatgctgcgcttcttcggcaacatgacgcagacgcag
atcgccaagcgcgtcggcatctcgcagatgcacgtctcgcggctgctcgcccagacactg
cagcacctgcgcgagaagctcaccgacgagccgtga
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