Amycolatopsis bartoniae: AMYBAR_002278
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Entry
AMYBAR_002278 CDS
T10755
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMYBAR_002278 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abar03019
]
AMYBAR_002278 (recQ)
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_002278 (recQ)
Enzymes [BR:
abar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMYBAR_002278 (recQ)
Messenger RNA biogenesis [BR:
abar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMYBAR_002278 (recQ)
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMYBAR_002278 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
XMG33402
LinkDB
All DBs
Position
2356287..2358104
Genome browser
AA seq
605 aa
AA seq
DB search
MTSTETDALGVLRRVFGYDSFRGEQEAIVEHVIAGGDALVLMPTGGGKSLCYQIPSLVRP
GVGVVVSPLIALMQDQVDALRALGVRAGFLNSTQDHQQRRETEQAFLAGELDLLYLAPER
LRLESTTELLGRGKVALFAIDEAHCVSQWGHDFRPDYLALSELHERWPDIPRIALTATAT
KATHAEIASRLNLGEARHFVASFDRPNIQYRIAPKNNPQKQLLELLRTEHAGDAGIVYCL
SRASVEKTAEFLSQNGIPAVPYHAGLDSRTRAKNQARFLREDGLVVVATIAFGMGIDKPD
VRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIETSEGDAAHRRR
LSTHLDAMLALCETVECRRVQLLNYFGQQGEPCGNCDTCLAPPESWDGTVAAQKLLSTVY
RLQHERRQKFGAGQVIDILLGKQTPKVQQHRHDELTVFGVGTELSEGEWRGVVRQLLAQG
LLAVEGDYGTLVLTEASGDVLGRKREVRLRREPKREPKAARTAKKAAAAVEMPAEAAPVF
ERLRAWRGETAKNQGVPAYVIFHDATLRQIATERPSTLAGLGSVSGVGENKLAKYGEQIL
EVLGQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccaccgaaaccgacgcactcggcgtgctgcggcgcgtcttcggctacgactcc
ttccggggcgagcaggaggcgatcgtcgagcacgtcatcgccggtggcgacgcgctcgtg
ctcatgccgaccggcggtggcaagtcgctgtgctaccagatcccgtcactggtgcggccc
ggggtcggcgtggtcgtctcgccgctgatcgcgctgatgcaggaccaggtggacgcgctg
cgggcgctgggcgtgcgggccgggttcctcaactcgacgcaggaccaccagcagcgccgc
gagaccgagcaggcgttcctcgccggtgagctggacctgctgtacctcgcgccggagcgg
ctgcggctggagtcgaccaccgagctgctcggccgcgggaaggtcgcgttgttcgcgatc
gacgaggcgcactgcgtgtcgcagtggggccacgacttccggccggactacctcgcgctg
tccgagctgcacgagcgctggcccgacatcccgcgcatcgcgctgacggccacggccacg
aaggcgacccacgcggagatcgcgtcccggctcaacctgggcgaggcgcggcacttcgtc
gcgagcttcgaccggccgaacatccagtaccggatcgcgccgaagaacaacccgcagaag
cagctgctggagctgctgcgcaccgagcacgccggagacgcgggcatcgtgtactgcctg
tcgcgggcgtcggtggagaagaccgcggagttcctgtcgcagaacgggattccggccgtg
ccctaccacgcggggctcgactcgcgcacccgcgcgaagaaccaggcccggttcctgcgc
gaggacgggctggtcgtcgtggccaccatcgcgttcgggatgggcatcgacaagccggac
gtgcggttcgtcgcgcacctcgacctgccgaagtcggtggaggggtactaccaggagacg
ggacgtgcgggccgcgacgggctgccgtcgacggcgtggctcgcctacgggctgcaggac
gtggtgcagcagcgcaagatgatcgagacgtccgagggcgacgcggcgcaccggcgccgc
ctgagcacgcacctcgacgcgatgctggcgctgtgcgagacggtcgagtgccgccgcgtg
cagctgctgaactacttcgggcagcagggcgagccgtgcggcaactgcgacacgtgcctg
gcaccgccggagtcctgggacggcacggtcgccgcgcagaaactactgtccaccgtgtac
cgattgcagcacgagcggcggcagaagttcggcgccgggcaggtcatcgacatcctcctg
ggcaagcagacgccgaaggtgcagcagcaccggcacgacgagctgaccgtgttcggcgtg
ggcaccgagctgtccgagggcgagtggcgcggcgtcgtgcggcagctgctggcgcagggg
ctgctcgccgtcgaaggcgactacggcacgctggtgctgaccgaggcgagcggcgacgtg
ctcggccgcaagcgcgaggtccggctgcgccgcgagcccaagcgggagccgaaggcggcg
cgtaccgcgaagaaggccgcggcggcggtggagatgcccgccgaggcggcgccggtgttc
gagcgcctgcgggcctggcgcggggagacggcgaagaaccagggcgtgccagcatacgtc
atcttccacgacgccacgctgcggcagatcgccaccgagcgaccgtccactttggcggga
ctcggcagtgtcagcggcgtgggcgagaacaagctggccaagtacggcgagcagatcctc
gaggtgctggggcagtag
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