Amycolatopsis bartoniae: AMYBAR_002289
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Entry
AMYBAR_002289 CDS
T10755
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar00630
Glyoxylate and dicarboxylate metabolism
abar00680
Methane metabolism
abar01100
Metabolic pathways
abar01120
Microbial metabolism in diverse environments
abar01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMYBAR_002289 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
AMYBAR_002289 (fdhF)
Enzymes [BR:
abar01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
AMYBAR_002289 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4
Fer4_7
Fer4_Nqo3
Fer4_21
Fer4_9
Fer4_2
Fer4_10
Fer4_6
Fer4_18
Fer4_16
Fer4_4
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
XMG33413
LinkDB
All DBs
Position
complement(2370998..2373808)
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AA seq
936 aa
AA seq
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MSLLKEPDFGTPAKAGPATVAVEVDGLPVTVPEGTSVLRAAALSGIEIPKLCATDSLEAF
GSCRLCLVEIDGRKGTPASCTTPVAEGMRVRTQTPRLEKLRQGVMELYISDHPLDCLTCA
ANGDCELQDMSGAVGLRQVRYGYEGANHLGQEKDTSNPYFDFDPSKCIACSRCVRACDEI
QGTLALTIEGRGFGSKVAASAGELFLDSECVSCGACVQACPTATLEEKSVVDLGMPGRTV
LTTCAYCGVGCSFKAELRGDELVRMVPYKDGGANEGHSCVKGRFAFGYATHPDRQLQPML
RESIDDEWRVVGWDTAIAHVAGRMREIQARHGVGAIGGITSSRCTNEEVYVVQKMVRAAF
GNNNVDTCARVCHSPTGYGLKQTFGTSAGTQDFRSVAKADVLVVIGANPTDGHPVFASRM
KRRLREGAKLIVIDPRRIDLVRTPHIEATHHLQLAPGTNVALVNALAHVAVTEGLVDRSF
VDERCEEFDQWAEFIARQENSPEATEGITGVPAQELRAAARLYATAGNAAIYYGLGVTEH
SQGSTMVMGMANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELSGYRHISDDAV
RTVFEDLWGRELLAEPGLRIPNMFDAAIDGSFRALFVQGEDIAQSDPNTRHVTAALRAMD
LVVVQDLFLNETAKFAHVFLPGTSFLEKDGTFTNAERRINRVRPVMKPKSGKHEWEIVCE
IADAMGYPMAYGHPREIMAEIAAVTPTFAGVSFEKLDRLGSVQWPCNDKAPEGTPIMHVD
GFVRGKGRFVPTPFVPTSERSTRKFPLILTTGRILSQYNVGAQTRRTANVAWHPEDVLEI
HPHDAEVRGIRDGDEVTLSSRVGETSLHALLSDRMPVGVVYTTFHHPVTGANVVTTENSD
WATNCPEYKVTAVQIGLKTPHVPSAATAGAVPVPVD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcaaggaaccggacttcggcaccccggcgaaggcgggcccggccaccgtc
gccgtcgaggtcgacggcctgcccgtcaccgtgcccgaaggcacgtcggtcctgcgtgcc
gccgcgctgagcggcatcgagatccccaagctgtgcgcgaccgacagcctggaggcgttc
gggtcgtgccgcctgtgcctggtggagatcgacggccgcaagggcacgcccgcgtcgtgc
accacgcccgtcgccgagggcatgcgggtgcgcacgcagacgccgcggctggagaagctg
cgccagggcgtgatggagctgtacatctccgaccacccgctggactgcctgacgtgtgcg
gcgaacggcgactgcgagctgcaggacatgtccggcgcggtcgggctccggcaggtccgc
tacggctacgagggcgcgaaccacctcgggcaggagaaggacacgagcaacccgtacttc
gacttcgatccgtcgaagtgcatcgcgtgctcccgctgcgtccgcgcgtgcgacgagatc
cagggcacgctggcgctgaccatcgagggtcgcgggttcgggtccaaagtggccgccagc
gccggggagctgttcctggactccgaatgcgtgtcgtgcggggcgtgcgtccaggcgtgc
ccgacggcgactctcgaagaaaagtccgttgtggacctcgggatgcccggccgtacggtg
ctcaccacctgcgcgtactgcggcgtcggctgctccttcaaggccgagctgcgcggcgac
gagctggtgcgcatggtgccctacaaggacggcggcgcgaacgaggggcactcgtgcgtg
aagggccggttcgcgttcggctacgccacccaccccgaccggcagctacagcccatgctc
cgcgagtcgatcgacgacgaatggcgcgtggtgggctgggacaccgcgatcgcccacgtc
gccggccggatgcgggaaatccaggcccgccacggcgtcggcgcgatcggtggcatcacg
tcgtcccgctgcaccaacgaagaggtctacgtggtgcagaagatggtgcgcgcggcgttc
ggcaacaacaacgtcgacacgtgcgcccgcgtctgccactcccccaccggctacggcctc
aagcagacgttcggcacctccgcgggcacgcaggacttccgctccgtcgcgaaggccgac
gtgctcgtggtgatcggcgcgaacccgaccgacgggcacccggtgttcgcgtcacggatg
aagcggcggctgcgcgagggcgcgaagctgatcgtcatcgacccgcgccgcatcgacctc
gtgcgcaccccgcacatcgaggccacgcaccacctgcagctggcgcccggcacgaacgtc
gcactggtcaacgcgctcgcccacgtggcggtcaccgaaggcctcgtcgataggtccttt
gtggacgaacgctgcgaggagttcgaccagtgggccgagttcatcgcccgccaggagaac
agccccgaggcgaccgaggggatcaccggagtgcccgcgcaggaactccgggcagccgca
aggctctacgccaccgcgggcaacgcggcgatctactacggtctcggcgtcaccgagcac
agccagggttcaacgatggtcatgggcatggcgaacctcgcgatggccacgggcaacatc
ggccgcgagggcgtcggcgtgaacccgttgcgcgggcagaacaacgtgcagggctcgtgc
gacatgggctcgttcccgcacgagctgtccggctaccggcacatctccgacgacgccgtg
cgcacggtgttcgaggacctgtgggggcgcgagctgctggccgagccggggctgcgcatc
ccgaacatgttcgacgcggccatcgacggctcgttccgcgcgttgttcgtgcagggcgag
gacatcgcgcagtccgatccgaacacccggcacgtcaccgcggcgctgcgggcgatggac
ctggtggtggtgcaggacctgttcctcaacgagaccgcgaagttcgcgcacgtgttcctg
ccgggcacgtcgttcctggagaaggacggcacgttcaccaacgccgagcgccgcatcaac
cgggtgcgcccggtgatgaagccgaagtccggcaagcacgagtgggagatcgtctgcgag
atcgcggacgcgatgggctatccgatggcgtacgggcacccgcgggagatcatggcggag
atcgccgcggtcacgccgaccttcgccggggtgtcgttcgagaagctcgaccggctcggc
agcgtgcagtggccgtgcaacgacaaggcgcccgagggcacgccgatcatgcacgtggac
gggttcgtgcgcggcaagggccggttcgtgccgacgccgttcgtgccgacgagcgagcgc
agcacacggaagttcccgctgatcctgaccaccggccggatcctgtcgcagtacaacgtc
ggcgcgcagacccgccgcacggcgaacgtcgcgtggcatcccgaggacgtgctggagatc
cacccgcacgacgcggaggtccggggcatccgcgacggcgacgaggtgacgctgtccagc
cgcgtgggtgagacgtcgctgcacgcgctgctgtccgaccggatgccggtgggcgtcgtc
tacaccacgttccaccaccccgtcacgggcgcgaacgtggtgaccacggagaactccgac
tgggccacgaactgcccggagtacaaggtcaccgcagtccaaataggactgaagaccccg
cacgtgccgtcggccgcgacggccggggcggttccggtgccggtggactga
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