Amycolatopsis bartoniae: AMYBAR_002764
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Entry
AMYBAR_002764 CDS
T10755
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03030
DNA replication
abar03410
Base excision repair
abar03420
Nucleotide excision repair
abar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMYBAR_002764 (polA)
03410 Base excision repair
AMYBAR_002764 (polA)
03420 Nucleotide excision repair
AMYBAR_002764 (polA)
03440 Homologous recombination
AMYBAR_002764 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abar03032
]
AMYBAR_002764 (polA)
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_002764 (polA)
Enzymes [BR:
abar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMYBAR_002764 (polA)
DNA replication proteins [BR:
abar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMYBAR_002764 (polA)
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMYBAR_002764 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMYBAR_002764 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
XMG33874
LinkDB
All DBs
Position
2858376..2861111
Genome browser
AA seq
911 aa
AA seq
DB search
MSPSQNRSVANATATLPRSERPRLLLIDGHSMAYRAFFALPAENFKTKTGQVTNAVFGFT
SMLINLLRDEQPTHLAVAFDVSRQTFRSETYAEYKAGRSATPDDFKGQVDLVKEVLGVLG
IPVLAKEGFEADDIIATLTTQAVGENFDVLICTGDRDALQLVSEFVTVLYPRKGVSDLVR
YDPAGVNDKYGLTPEQYPDFAALRGDPSDNLPGIPGVGEKTATKWIQQFGSLGTLIDRVD
EVKGKVGDALRAHLDSVMLNRRLTELVRDVPLDATPEELALRPWDRDAVHRLFDELEFRV
LRDRLFATLQSAEPEAEQGFEVAGEAVPTGALAAWLEEHVEAGKPVGMSFRTTGASVAAD
AQSLTLAAPDGQGAYIDLSTLDESDEKALAAWLADPEMLKAGHSLKVPLHAVLARGWRFA
GLHLDTELAAYLVRPGQRSFELDDLVLRYLQRELRSEDGDDDGQLSLLDSDDGDQKVVQA
ELVRARAVAELAEALVEELGKIGGRELLQRIELPLLEVITELEAAGIAVDLDQLTELESH
YASRVRQAEADAFRVIGKQINLGSPKQLQVVLFDELAMPKTKRTKTGYTTDADALQTLFE
KTEHPFLQHLLEHRDATRLRVTVEGLIKSIADDGRIHTTLHQTIAATGRLSSVDPNLQNI
PIRTDEGRRIRDAFVVGPEYAELMTADYSQIEMRIMAHLSEDAALIEAFQSGFDFHAATA
ARVFGVEPTEVTGAQRAKIKAMNYGLAYGLSAYGLSNQLRISTEEARGLMDDYFERFGGV
RDYLRDIVVQAAKSGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADIIKV
AMLNVQRALKESELRSRLLLQVHDELVLEVADGEHAAVEALVRKEMGAAYELAVPLEVSV
GFGRSWNDAAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccagtcagaaccgatccgtagcgaacgccacagcgacactgccccgctccgag
cggccgcggctgttgctgatcgacggccactccatggcctaccgggcgttcttcgccctg
cccgcggagaacttcaagaccaagacggggcaggtcaccaacgccgtcttcgggttcacc
tccatgctcatcaacctgctgcgcgacgagcagcccacccacctcgcggtggcgttcgac
gtgtcgcggcagacgttccgctcggagacgtacgcggagtacaaggccggccgctcggcc
acccccgacgacttcaagggccaggtcgacctcgtcaaggaggtgctcggggtgctgggc
atcccggtgctggccaaggagggcttcgaggccgacgacatcatcgccaccctcaccacg
caggccgtgggcgagaacttcgacgtgctcatctgcaccggtgaccgggacgcgctgcag
ctggtcagcgagttcgtcacggtgctctacccgcgcaagggcgtgtccgacctggtgcgc
tacgacccggcgggcgtcaacgacaagtacggcctgacccccgagcagtacccggacttc
gcggcgctgcgcggcgacccgtcggacaacctgcccggcatccccggcgtcggcgagaag
accgccaccaagtggatccagcagttcggctcgctgggcacgctgatcgaccgggtcgac
gaggtgaagggcaaggtcggcgacgcgctgcgggcgcacctggactcggtgatgctcaac
cggcgcctcaccgagctggtgcgggacgtgccgctggacgccacgccggaggagctggcg
ctgcggccgtgggaccgcgacgcggtgcaccggctgttcgacgagctggagttccgggtg
ctgcgcgacaggctgttcgccacgctgcagagcgccgagccggaggcggagcagggcttc
gaggtggccggtgaggcggtgccgacgggcgcactggccgcctggctcgaagagcacgtc
gaggcgggcaagccggtcgggatgtccttccgcaccaccggcgcctcggtggccgccgac
gcgcagtcgctcacgctcgccgcgccggacggacagggcgcgtacatcgacctgtccact
ttggacgagtcggacgagaaggcgctcgccgcctggctggcggacccggagatgctcaag
gcgggccactcgctcaaggtcccgctgcacgcggtgctcgcccgcggctggcgcttcgcc
gggctgcacctggacaccgagctggcggcgtacctcgtgcgcccgggtcagcgctccttc
gagctcgacgacctcgtgctgcggtacctgcagcgcgagctgcgctcggaggacggcgac
gacgacgggcagctgtcgctgctcgactccgacgacggcgaccagaaggtggtgcaggcg
gagctggtgcgcgcccgcgcggtcgccgagctggccgaggcgctggtggaggagctgggc
aagatcggcggccgggagctgctgcagcggatcgagctgccgctgctggaggtcatcacc
gagctggaggccgcgggcatcgcggtcgacctcgaccagctgaccgagctggagtcgcac
tacgcgagccgcgtgcgccaggccgaggccgacgcgttccgggtcatcggcaagcagatc
aacctcggttcgccgaagcagctgcaggtcgtgctgttcgacgagctggcgatgccgaag
accaagcgcaccaagaccggctacaccaccgacgccgacgcgctgcagacgttgttcgag
aagaccgagcacccgttcctgcagcacctcctggagcaccgcgacgccacccggctgcgc
gtcaccgtcgaggggctgatcaagtcgatcgccgacgacgggcgcatccacaccacgctg
caccagaccatcgcggccaccggacgactgtcctctgtggacccgaacctgcagaacatc
ccgatccgcaccgacgagggccgccgcatccgcgacgccttcgtcgtcggcccggagtac
gcggagctgatgaccgcggactacagccagatcgagatgcggatcatggcccacctgtcc
gaggacgcggcactgatcgaggcgttccagtcgggcttcgacttccacgccgccaccgcc
gcgcgtgtgttcggcgtggagcccacggaggtcaccggcgcgcagcgggccaagatcaag
gcgatgaactacgggctcgcgtacggcctgtccgcgtacgggctgtccaaccagctgcgc
atctccaccgaggaggcgcgcgggctgatggacgactacttcgagcgcttcggcggggtg
cgcgactacctgcgcgacatcgtggtgcaggcggccaagagcggctacaccgagacgatc
ttcggccgccgccgctacctgcccgacctcaacagcgacaaccgccagcgccgcgagatg
gccgagcggatggcgctcaacgccccgatccagggcagcgccgccgacatcatcaaggtc
gcgatgctgaacgtgcagcgcgccctcaaggagtcggagctgcgcagccgcctgctgctg
caggtgcacgacgaactggtgctggaggtcgccgacggcgagcacgccgcggtggaagcg
ttggtgcgcaaggagatgggcgcggcgtacgagctggcggtgccgctggaggtctccgtc
ggcttcggccgctcctggaacgatgccgcgcactga
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