KEGG   Amycolatopsis bartoniae: AMYBAR_005759
Entry
AMYBAR_005759     CDS       T10755                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
abar  Amycolatopsis bartoniae
Brite
KEGG Orthology (KO) [BR:abar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abar03400]
    AMYBAR_005759
Enzymes [BR:abar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMYBAR_005759
    5.6.2.6  RNA 3'-5' helicase
     AMYBAR_005759
DNA repair and recombination proteins [BR:abar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AMYBAR_005759
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII AAA_25 DUF6406 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: XMG36807
LinkDB
Position
6101635..6106251
AA seq 1538 aa
MMENVTDVLDSFSPVTRDWFAGAFAAPTEAQAGAWRAAQAGEHALVVAPTGSGKTLAAFL
WALDRLAVGPPPETPAQRCRVLYVSPLKALAVDVQRNLRAPLAGMSQAARRLGRTPPDIA
VGMRTGDTPAADRRSFARTPPDILVTTPESLFLILTSSARESLRGVETVIVDEVHAVAGT
KRGAHLALSLERLDALLPRPAQRIGLSATVRPVDEVSAFLGGGRPVRVVQPKPSKTIEVR
VEVPVEDMANLDGPPPSPLDSLPLPSEGGIGTNEEIAGAAVRRPSIWPAVEERVLELIRE
HRSTIVFANSRRLTERLTARLNELAAEHTELEPGQRFPAEAIGESGHTTGAEVTVARAHH
GSMSREQRTHVEEELKSGRLPCVVATSSLELGIDMGAVDLVVQIEAPPTVASGLQRVGRA
GHHVGAVSTGVMFPKFRGDLVSCAVVSERMTSGAIEAVRYPRNPLDVLAQQVVSMVALEP
WTVAELGALVRRAAPFAALPDDALLAVLDMLAGRYPSEEFGELRPRITWDRVTGELRGRP
GAQRLAVTSGGTIPDRGLFTVMTPGSEGQSGSRVGELDEEMVYESRVGDTILLGTSSWRI
TDITHDRVIVVPAPGEPARMPFWKGDAPGRPLELGRALGAFVREVSSADASKARARAEAA
GLDQRACDNLLTYLEEQRAATRHVPNDRTILLERFRDELGDWRIVLHSPFGAQVNAPWAL
AIAARLRENRGVDAQVMHSDDGIVLRLPDALDDDGGEVTIGADDVLIDPEEVEQLIVAEV
GGSALFAARFRECAARSLLLPRRDPRRRTPLWQQRQRASQLLAVAAKYERFPVVLEAMRE
CLQDVYDVGGLRELMTDVRSRRVRLVEVETPSASPFARSLMFGYVGMFLYETDAPLAERR
AAALALDSALLAELLGTEAIRELLDPEVVVEVERSLQRLEPDRHARNAEDAADLLRFLGD
LSVADAEARGIEQAWLTDLVGQRRAIAVRIAGEERYLAIEDAGRVRDALGVALPIGVPEA
FTEPVADPLGDLLARYARTHGPFPAQQAAERFGLGAAVVSGVLDRLTAEGRLVRGELSPE
TRGAGVEYCDSAVLRRLRRASLARLRAEVEPVEPAALGRFLPSWHGVGARMRAAPTADDV
LSVVEQLAGAPLPASAVESLILPSRLPGYYPALLDELTTAGEVTWAGCGSLAGGDGWVAL
APSDVADLLLPEIEENAPTSPLHEAILSTLEGGALFFRQLVDRVTMLVDKAPNDGDVVAA
LWDLVWAGHVTGDTLGPLRALVSGRGAAHKPRQSAPRGRYARMRAGRPAMPSRSGPPTVA
GRWGLTPLRESDPTRRTYARTEAFLERHGVLTRGALETERVSGGFSGIYKVLRGMEDSGQ
VIRGYVVEGLGAAQFAARGAVDRLRALSDTAGGRRRVDAVVLAATDPAQPYGAALAWPAA
VGDTKHRAARKAGALVVLADGLPVLYVERGGKSLLSFTEDDEALRAAAHALSRAVREGWL
GQLAVQRADGEHALTSALADVLRDAGFRATPKGLRLRA
NT seq 4617 nt   +upstreamnt  +downstreamnt
atgatggaaaacgtgacagacgtgctcgactccttctcccccgtgaccagggactggttc
gcgggggcgttcgccgcgcccacggaggcacaggccggggcgtggcgggcggcgcaggcg
ggcgagcacgcgctggtcgtggcgccgacggggtcgggcaagaccctcgcggcgttcctg
tgggcgctggaccggctcgccgtcgggccgccgcccgagaccccggcccagcgctgccgg
gtgctctacgtctccccgctcaaggcgctcgccgtcgacgtgcagcggaacctgcgggct
ccgctcgccggcatgtcgcaggcggcccggcggctggggcggacgccaccggacatcgcg
gtgggcatgcgcacgggggacacgccggccgccgacagacggtccttcgcccgcacgccg
ccggacatcctggtcaccacgccggagtcactgttcctgatcctgacctcgtcggcgcgc
gaatcgctgcgcggggtggagacggtgatcgtcgacgaggtgcacgcggtggcgggcacc
aagcgcggggcgcacctcgcgctgtcactcgaacggctggacgcgctgctgccccgcccg
gcacagcgcatcggtctgtcggcgacggtccggccggtcgacgaggtgagcgcgttcctc
ggcggcgggcggccggtgcgggtggtgcagcccaagccgtcgaagaccatcgaggtgcgg
gtcgaggttccggtcgaggacatggccaatctcgacggcccgccgccctctccgctggac
tctctgccgctgccgtcggagggcgggattggcaccaacgaggagatcgcgggggcggcc
gtgcgcaggccgtcgatctggcccgcggtcgaggaacgcgtgctcgaactgatccgcgag
caccggtccacgatcgtcttcgccaactcccggcggctcaccgaaaggctcaccgcccgg
ctcaacgagctcgccgccgagcacacggaactcgagccggggcaacggtttccggcggag
gccatcggcgagtccgggcacaccacgggcgccgaggtcaccgtggcgcgggcgcaccac
gggtcgatgtcgcgggagcagcgcacccacgtcgaggaggagctgaagtcggggcgactg
ccctgcgtggtcgcgacgtcctcgctggagctgggcatcgacatgggcgcggtcgacctc
gtggtgcagatcgaggcgccgcccaccgtcgcgtccgggctgcagcgcgtgggccgggcc
gggcaccacgtcggggccgtgtccaccggggtgatgttcccgaagttccgcggtgacctc
gtgtcgtgcgcggtggtgtccgagcgcatgacgagcggggccatcgaggcggtgcggtac
ccgcggaacccgctggacgtgctggcgcagcaggtcgtgtccatggtggcgctcgaaccg
tggacggtggcggagctgggcgcgctcgtgcgccgggcggcgccgttcgccgcgctgccc
gacgacgcgctgctcgcggtgctcgacatgctcgccgggcggtatccgagcgaggagttc
ggcgagctgcggccacggatcacgtgggaccgcgtgacgggcgagctgcgcgggcggccg
ggcgcgcagcggctcgcggtcacctccggcggcacgatccccgaccgcgggctgttcacg
gtcatgacgccgggcagcgagggccagtccgggtcgcgggtcggcgagctggacgaggag
atggtctacgagtcccgggtcggggacacgatcctgctcggcacgtcgtcgtggcgcatc
accgacatcacgcacgacagggtgatcgtcgtgcccgcgccgggtgagcccgcccgcatg
ccgttctggaagggcgacgcgccgggacggccgctcgaactggggcgtgcactgggcgcg
ttcgtgcgcgaggtgtccagtgcggacgccagcaaggcccgggcgcgggccgaggcggcg
gggctcgaccagcgggcgtgcgacaacctgctgacgtacctggaggagcagcgggccgcg
acccggcacgtgcccaacgaccgcacgatcctgctcgaacggttccgcgacgagctgggc
gactggcggatcgtgctgcactccccgttcggcgcgcaggtcaacgcgccgtgggcgctg
gcgatcgcggcgcggctgagggagaaccgcggggtcgacgcccaggtcatgcactccgac
gacggcatcgtgctgcgcctgcccgacgcgctcgacgacgacggcggcgaggtgacgatc
ggggcggacgacgtgctgatcgaccccgaggaggtcgagcagctgatcgtcgccgaggtc
ggcgggtcggcgttgttcgccgcccggttccgggaatgcgccgcgcgctcgctcctgctg
ccccgccgggacccgcggcggcgcactccgctgtggcagcaacggcagcgggcctcgcag
ctgctggcggtcgcggcgaagtacgagcggttcccggtggtgctcgaagcgatgcgcgag
tgcctgcaggacgtctacgacgtgggcgggctgcgggagctgatgacggacgtgcggtcc
cggcgcgtccggctcgttgaggtggagacaccgtcggcgtcgccgttcgcgcgcagcctg
atgttcggctacgtcggcatgttcctgtacgagacggacgcgccgctggccgagcgcagg
gccgcggcgctggcgctggactcggcgctgctcgccgagctgctcggcacggaggcgatc
cgggagctgctcgatcccgaggtcgtcgtcgaggtcgagcggtcgctgcagcggctggag
ccggacaggcacgcccgcaacgccgaggacgcggcggacctgttgcggttcctcggcgac
ctgtcggtggccgacgccgaagcgcgcgggatcgagcaggcatggctcaccgatctcgtc
gggcagcggcgcgcgattgccgtgcggatcgccggtgaggagcggtatctcgcgatcgag
gacgccggccgggtccgggacgcgctgggagtcgcgttgccgatcggcgtgccggaggcg
ttcaccgaaccggtcgccgatccgctcggtgacctgctggcccgttacgcccggacgcac
ggcccgtttcccgcgcagcaggcggcggagcggttcgggctcggtgccgcggtggtgtcg
ggggtgctggaccggctgaccgcagagggccggctggtgcgcggcgagctgagtcccgag
acgcgtggcgcgggggtggagtactgcgactccgcggtgctgcgccgtctgcggcgggca
tcgctggcccggttgcgggccgaggtcgagcccgtggaaccggcggcgctgggccggttc
ctgccgtcgtggcacggcgtcggggcgcggatgcgcgcggcgccgacggcggacgacgtg
ctgtcggtggtggagcagctcgccggtgcgccgctgccggcgagcgcggtggagtcgctg
atcctgccgagcaggctgcccgggtactacccggcgctgctggacgagctgaccacggcg
ggcgaggtgacgtgggcgggctgtggttcgctggcgggcggcgacggctgggtggcgctg
gcgcccagtgacgtcgccgacctgctgctgccggagatcgaggagaacgcgcccaccagt
ccgctgcacgaggcgatactgtccactttggagggcggggcgctgttcttccggcagctg
gtggaccgcgtgacgatgctggtggacaaggcgcccaacgacggtgatgtggtggccgcg
ctgtgggacctggtgtgggccgggcacgtcaccggcgacacgctggggccgttgcgggcg
ctcgtgtccggccggggcgcggcgcacaagccacggcagtcggcgccgcgcggccggtac
gcgcggatgcgggcgggcaggcccgcgatgccgtcccgcagcggtccgccgacggtcgcg
ggccggtgggggctcacgccgttgcgcgagagcgacccgacgaggcggacgtacgcgcgc
acggaggcgttcctcgaacggcacggcgtgctcacccggggcgcgctcgagaccgagcgg
gtcagcggcggtttctccgggatctacaaggtgttgcgcggcatggaggactccgggcag
gtgatccggggatatgtcgtcgaagggctcggcgcggcgcagttcgcggcccgcggcgcg
gtggaccggttgcgtgcgctgtccgacaccgcgggcgggcggcggcgcgtcgacgcggtg
gtgctcgcggccaccgacccggcgcagccgtacggcgcggcgctcgcatggccggccgca
gtcggcgacacgaaacaccgggccgcccgcaaggcgggggcgctcgtggtgctggccgac
gggctgcccgtgttgtacgtcgagcgcgggggcaagtcgctgctgtcgttcaccgaggac
gacgaggcgctgcgggcggcggcccacgcgctgtcgcgcgcggtgcgggagggctggctg
gggcagctggccgtgcagcgtgcggacggggagcacgcgctgacgtcggcgctggcggat
gtgctgcgggacgccggtttccgggcgacgccgaaggggctgcggctgcgggcctag

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