Amycolatopsis bartoniae: AMYBAR_006058
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Entry
AMYBAR_006058 CDS
T10755
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar00300
Lysine biosynthesis
abar00470
D-Amino acid metabolism
abar01100
Metabolic pathways
abar01110
Biosynthesis of secondary metabolites
abar01120
Microbial metabolism in diverse environments
abar01230
Biosynthesis of amino acids
Module
abar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMYBAR_006058
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMYBAR_006058
Enzymes [BR:
abar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AMYBAR_006058
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
XMG37101
LinkDB
All DBs
Position
complement(6413167..6414408)
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AA seq
413 aa
AA seq
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MIGERLRAELVEKYGTPLYVYELDRIGAARQALFDCLPEKTEVFYAVKANPHPEVIRELA
APGQTGCKAEISSAGELSLVLQAGRDPADILYTGPAKTEHELFLALKAGVRLFSAESPAD
LAHIGAVARGLGVVADCLLRINDVAVGATGARMTGRASQFGIDSELLGELMPDLRAVPGT
VLVGLHFFSQSNAQDEQALLAEFGQAVGTAVRLQQQFGVPLRFLDLGGGFACPYGRTGTP
PTYSGLRSALEAILDRHLPRWRGNDVRIAVESGRYLVGASGTLLLGVRSVKISRGRRFVL
LDGGVNVFGGLSGIGRLLPVEVEVGAGCGAPVASLAGPLCTPGDILARQAAVPEVVPGGT
VAIPNAGAYGPTASLLAFLGRSAPTEVVLRGEEVVSVSRLELRRVREHAGKVG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgaaagactgcgagcggaactggtcgaaaagtacgggacaccgctgtatgtc
tacgagctggaccggatcggtgctgcccggcaagcactgttcgactgtctgccggagaag
acggaggtcttctacgccgtcaaggccaacccacatccggaagtcattcgcgaactggcc
gcgccgggacagaccgggtgcaaggccgagatcagttcggcgggcgaactttcgctcgta
ctccaagccggccgggatcccgctgacatcctctacactggcccggcgaaaaccgaacac
gagttgttcctggcgctcaaggccggggtccgcctcttctccgcggagtcaccggccgac
ctggcacacatcggtgcggtggcccgtggtctcggcgtggtggccgattgcctgctcaga
atcaacgacgtcgcggtgggagccaccggcgcccggatgaccggccgtgcgagccagttc
ggcatcgacagcgagttgctcggtgagttgatgccggatctccgcgccgtacccggcacg
gtactcgtggggctgcacttcttctcccagagtaacgctcaggacgaacaagccctcctc
gcggagttcgggcaggcagtcgggaccgctgtccggctgcagcaacagttcggtgtgccc
ttgcggttcctcgacctgggcggaggtttcgcctgcccttacggccgtaccggtactcct
ccgacctactcgggactgcgttccgctctcgaggcgatcttggatcggcacctgccacgt
tggcggggcaacgacgtgcggatagctgtggaatcgggccgctatctggtgggcgcgagc
ggcaccctcctgctgggggtgcgcagtgtcaagatcagccggggccgacggttcgtcctg
ctcgacggtggcgtgaacgtcttcggtgggctctccggaatcgggaggctactgccggtc
gaggtggaagtcggggcagggtgtggcgcaccggtggcgagcctggcaggccctctttgc
accccaggggacatcctggccaggcaggcagcagtacccgaggtcgttcccggtggcaca
gtcgctattccgaacgcgggggcgtatggacccaccgccagtcttctcgcgttcctgggc
cgatctgcgcctaccgaggtcgtgctgcgaggcgaggaggtcgtctccgtgtcgaggctg
gaattgcgacgtgtgagggaacacgcaggaaaggtggggtga
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