Amycolatopsis bartoniae: AMYBAR_006372
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Entry
AMYBAR_006372 CDS
T10755
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
abar Amycolatopsis bartoniae
Pathway
abar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMYBAR_006372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abar02000
]
AMYBAR_006372
Transporters [BR:
abar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMYBAR_006372
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_29
nSTAND1
AAA_16
DUF3987
TniB
Motif
Other DBs
NCBI-ProteinID:
XMG37409
LinkDB
All DBs
Position
6752900..6754654
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AA seq
584 aa
AA seq
DB search
MSTEATTARLAASGSVLSIADLKISFATDDGVVEAVKGIGFDVKPGEIVAVVGESGSGKS
VTSMSVLGLLPRTSKISGDLRLDDRELVGLKDKDMRRVRGNDIAMIFQEPMSALNPVYTV
GWQIREALRAHQDISREAADKRALELLDMVGIPNPVERFKQYPHQLSGGLRQRVVIAMAI
ACDPKVIIADEPTTALDVTVQAEILGLLRKLRDTLNTAIVLITHDMGVVADLADRVVVMY
QGEIVEQAPVHELFASPREDYTKRLLAAVPVLGQRPEGRRLLDEVQDVPAEDIRLSDAEL
ESHIRTDAPALEIKDLVLEYPGKRRQAKNRAVDGVSLHIDKGEILGLVGESGSGKSTVGR
CAIRLLKPTEGTVSVAGRDITNLSTKELRPLRRYFSIVFQDPASTLDPKMTIGESIAEPM
VLHKMFQGKELNDRVVSLLDSVELSGQYRNRYPHELSGGQRQRVSIARALALDPHLLIAD
EPTSALDVSVQARVLDLFLNLQQSLGFACLFISHDLAVVDLLADRVAVMQRGKLVEVGER
DQVLHNPQQEYTRRLLSAAPVADPVLQAERRAAWEAGKLAPVAD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactgaagcgacgacggcgaggctggccgcctcgggttccgtcctgtccatcgcg
gacctgaagatctccttcgcgaccgacgacggcgtggtcgaggcggtcaagggcatcggc
ttcgacgtcaagcccggcgagatcgtcgccgtcgtcggcgagtccggttccggcaagtcc
gtgacctccatgtcggtgctcggcctgctgcccaggaccagcaagatctccggtgacctg
cgcctcgacgaccgcgagctggtcggcctcaaggacaaggacatgcgccgggtccgcggc
aacgacatcgcgatgatcttccaggagccgatgagcgccctgaaccccgtgtacacggtg
ggctggcagatccgcgaggcgctgcgcgcgcaccaggacatctcacgcgaggccgccgac
aagcgggccctcgaactgctcgacatggtgggcatccccaacccggtcgagcggttcaag
cagtacccgcaccagctctccggtggtctgcggcagcgcgtggtgatcgccatggccatc
gcgtgcgacccgaaggtgatcatcgccgacgagcccaccacggcgctcgacgtcaccgtg
caggcggagatcctcggcctgctgcgcaagctgcgggacaccctgaacaccgcgatcgtg
ctgatcacccacgacatgggcgtggtcgccgacctcgccgaccgggtcgtggtgatgtac
cagggcgagatcgtcgagcaggcgcccgtgcacgagctgttcgcctcgccgcgggaggac
tacaccaagcgcctgctggcggccgtcccggtgctcggccagcgtcccgagggccgtcga
ctgctggacgaggtgcaggacgtcccggcggaggacatccggctcagcgacgccgagctg
gagtcccacatccggacggacgcgcccgcgctggagatcaaggacctggtgctggagtac
cctggcaagcgccgccaggccaagaaccgcgccgtggacggggtttcgctgcacatcgac
aagggcgagatcctgggcctggtgggcgagtccggttcgggcaagtccactgtgggccgt
tgcgcgatccgcctgctgaagcccacggagggcaccgtctccgtggcggggcgtgacatc
accaacctgtccacgaaggagctgcggccgctgcgccggtacttctccatcgtgttccag
gacccggcgtccacactggacccgaagatgaccatcggcgagtcgatcgccgagccgatg
gtgctgcacaagatgttccagggcaaggaactcaacgaccgcgtggtgtccctgttggac
agcgtcgagctgtcggggcagtatcgcaaccggtacccgcacgagctgtcgggcgggcag
cgccagcgcgtgtccatcgcccgcgccctggcactggacccgcatctgctgatcgcggac
gagcccacctcggcgctcgacgtctcggtgcaggctcgcgtgctggacctgttcctgaac
ctgcagcagtccctcgggttcgcctgcctgttcatcagccacgacctcgccgtggtcgac
ctgctggccgaccgggtggccgtgatgcagcgcggaaagctcgtcgaggtcggcgagcgt
gaccaggtgctgcacaacccgcagcaggagtacacgaggcgcctgctgtcggcggcgccg
gtggcggacccggtgctccaggccgagcgccgggcagcgtgggaggccgggaagctcgct
ccagtggcggactga
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