Amycolatopsis bartoniae: AMYBAR_006397
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Entry
AMYBAR_006397 CDS
T10755
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
abar Amycolatopsis bartoniae
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_006397
DNA repair and recombination proteins [BR:
abar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMYBAR_006397
Archaeal homologous recombinant proteins
AMYBAR_006397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
SMC_ScpA
TsaE
AAA_21
Augurin
NACHT
nSTAND3
ABC_tran
AAA_22
AAA_15
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
XMG37434
LinkDB
All DBs
Position
complement(6780025..6782985)
Genome browser
AA seq
986 aa
AA seq
DB search
MRLHRLEVAAFGPYRKRQVVDFDALGSDGLFLLHGDTGAGKTTLLDAVAFALFGTVPGAR
GQVKRLRCDFAEPDEATEVVLELTVQGQRMRLVRSPEYQRPKRRGEGTTTQQAKASLTWL
DGVPGGQPPEGLVRIDEVGRTVQGLLGMTHEQFFQVVLLPQGEFAKFLRADTDEREKLLE
RLFGTKRFADVEAWFRELRVEKRRELDRRRQDVREWVARFAQVAGREAPEENLAEWVGQV
RADVEGAVAETKAVEQQVRSALDSAEKALLERRNAAERVQRLRAARRRLSVLDGQKSERA
QWNAELAGARRAATVLRAAEQADRCAGQLEEARTAESQRARRLAAVGHQDVDADAVELRR
YAGKLREEAGALAGLVAEAEQQVRDQREIRQLVERVGEARAKVQVLTEKLDGIPQRVQEL
RAQLDVSNAAVVQLEALRTKETELTTAVRDAAGLPGALEALSRAEARVRAAVDAHQEARD
HRLKLRELRLEGMAAELAAGLVDGGACPVCGSAEHPAPARPADGSVDREQEAEAEAAVAR
AEAARGAAEAAKHRAETELAALRERLRGRTGDELEAELRQVKAQVADIEAKSRQRARLSA
ELRSAEAETKSLTDELVAAEQAATAAETRRRTLVDRVEERARRLDEARGEHEDVGARRAH
LAGLIQALDALTEARLARATAERHLAERQEELRSCLGQAGFETVDEMRAAARPDDVMARL
EKRLSDAAAEEAAARAVLADPELAGISPDDEVDVESAVETARAARVAAETAVAEARAAAT
RAGELGRLAGRLTQATEAIRPLEEEFAELDALTDVVNGRGQNARRMSLRSYVLAARLEEV
AVAATARLQAMSQGRYSFVHTDRAGAHGTKGGLGLDVLDDYSGTVRPAKTLSGGESFLAS
LSLALGLADVVAAETGGALLDTLFVDEGFGTLDAETLDVVMDILDELRAGGRVVGLVSHV
EELRQRIPTRLRVRKARTGSTLEVRM
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcacaggctcgaggtcgccgcgttcggcccgtaccggaagcgccaggtcgtc
gatttcgacgccctcggttccgacgggttgttcctgctgcacggggacacgggcgcgggc
aagacgacgctgctcgacgccgtggcgttcgcgttgttcggcaccgtgcccggcgcgcgc
ggccaggtgaaacggctgcgctgtgacttcgcggagccggacgaagccaccgaggtcgtc
ctcgaactgacagtgcaggggcagcggatgcggctcgtgcgcagccccgagtaccagcgc
ccgaagcgccgtggcgagggaaccacgacgcagcaggcgaaggcgtcgctgacctggctg
gacggcgtccccggcggccagccgcccgagggcctggtgcgcatcgacgaggtcggccgc
actgtgcagggcctgctcggaatgactcacgaacagttcttccaggtggtgttgctgccg
cagggcgagttcgccaagttcctccgcgccgacaccgacgagcgggagaagctgcttgag
cggttgttcggcaccaagcgtttcgccgacgtggaagcgtggttccgtgaactccgtgtg
gaaaagcgccgggaactcgaccgcaggcgtcaggacgtgcgggagtgggtggcgcgtttc
gcgcaggtggcgggccgggaggcgccggaggagaaccttgccgagtgggtgggccaggtt
cgagccgacgtcgaaggtgccgtggcggaaacgaaagccgtggaacagcaggtccggtcc
gctttggacagtgcggaaaaggcgctgctcgaacgcaggaatgccgccgaacgcgtacag
cggttgcgtgcggcgcgacgtcgtctgtctgttttggacggacagaagtccgaacgcgcc
cagtggaacgcggagctggcgggcgcgcggcgggcggcgacggtgttgcgggcggccgag
caagccgaccgttgcgctgggcaactggaagaggcacggacagccgagagccagcgggcg
cggcggctcgcagccgtcggtcaccaggatgtcgacgccgacgccgtggaactgcgcagg
tacgccgggaagctgcgggaggaagccggggcgctggcgggcctcgtcgcggaggcggag
cagcaggtccgtgatcagcgggagatccggcagctggtcgagcgcgtcggtgaggcgcgc
gcgaaggtgcaggtgctcaccgagaaactcgacggaattccgcagcgggtgcaggagctg
cgggcgcagctggacgtctccaacgcggcagtagtccagctggaagccctgcgtaccaag
gaaaccgagctgacgacggctgtgcgggacgccgccggtctgccgggcgcgcttgaggcg
ctcagtcgcgcagaggcacgcgtgcgagccgctgttgacgcgcaccaggaggcccgggac
caccggttgaagctgcgcgaactgaggctcgaaggcatggcggccgagctggccgcgggc
ctcgtcgacggcggggcgtgcccggtctgcggttcggcggagcatccggcgcccgctcgt
cccgcggacgggtcggtcgaccgcgagcaggaagcggaggcggaggccgccgtcgcgcgt
gccgaagcggcccggggcgcggccgaagccgcgaagcaccgggcggagaccgagctggcc
gcgttgcgggaacggttgcggggccggacgggggacgaactggaggccgagctccggcag
gtcaaggcgcaggtcgcggacatcgaagcgaagtcccgtcagcgggcccgcctctcggcc
gaactgcgctccgccgaggcagagacgaagtcgctgacggacgagcttgtcgccgctgag
caggccgccacggctgccgagacccggcggcgcacgctggtggaccgggtcgaggagcgc
gcccggcggcttgacgaggctcgcggcgagcacgaggacgtgggcgcccggcgtgcgcac
ctcgccgggctcatccaggctctcgacgcgctcaccgaagcgcggctggcgcgggcgacc
gccgagcggcacctggcggagcgccaggaggaactgcggtcctgcctggggcaggccggt
ttcgagacggtggacgagatgcgtgcggcggcgcgtcccgacgacgtcatggcccggttg
gagaagcgcctttccgacgccgcggccgaggaagccgccgcccgcgcggtgctcgccgat
ccggagctcgccgggatttcgccggacgacgaggtggacgtcgagtcggcggtggagacg
gcaagggcggcgcgagtggccgcggaaacggcggtcgccgaagcacgtgccgccgccacc
cgcgccggcgagctcggccggctggccggccggttgacgcaggcgaccgaggcgatcagg
ccactcgaagaggagttcgcggagcttgacgcgctgaccgacgtggtcaacgggcggggc
cagaacgcccgccgcatgtccctgcgctcctacgtgctcgcggcccggctcgaagaggtc
gcggtcgccgccacagcccggctgcaggcgatgagccagggccggtactcgttcgtgcac
acggaccgcgccggtgcgcacggcacgaagggcggcctcgggctcgacgtgctggacgac
tactcgggcaccgtccggcccgcgaaaaccctgtccggtggcgagtcgttcctcgcctcg
ctctcgctggcgctcggcctggccgacgtggtcgccgccgagaccgggggtgcactgctg
gacaccctgttcgtcgacgagggcttcggcacgctggacgccgaaaccctcgacgtcgtg
atggacatcctcgacgagctgcgagccggcggacgcgtggtcggcctcgtttcgcacgtc
gaggagctgcgccagcgcatcccgacccggctgcgggtgcgcaaggcgcggaccggttcg
acgctggaggtgcggatgtga
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