KEGG   Acidisarcina polymorpha: ACPOL_0247
Entry
ACPOL_0247        CDS       T05576                                 
Name
(GenBank) putative ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
abas  Acidisarcina polymorpha
Brite
KEGG Orthology (KO) [BR:abas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abas03400]
    ACPOL_0247
Enzymes [BR:abas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACPOL_0247
    5.6.2.6  RNA 3'-5' helicase
     ACPOL_0247
DNA repair and recombination proteins [BR:abas03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACPOL_0247
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH2_Lhr WH3_Lhr ResIII DUF6406 AAA_25 NMB0537_N DEXQc_Suv3
Other DBs
NCBI-ProteinID: AXC09632
UniProt: A0A2Z5FS75
LinkDB
Position
248020..252774
AA seq 1584 aa
MDPAGNAVAKDLPEDPGAVLDLFHPVTAKWFRAVFDQPTAPQRQGWPAIARGENTLIFAP
TGTGKTLTAFLWCLDRLMLHPPKDEEEACRVIYISPLKALAVDVERNLRSPLAGIANMAA
REGIPFRQPEISVRTGDTSQKERGLFKRHPAEILITTPESLYLLLTSEAAASLRAVDTVI
IDEIHALVPTKRGAHLALSLERLQAVTSQPLQRIGLSATQRPLEEVAHFLAGATINPAGD
ESNGENLLAQMEEEYSSTQDDIAAERTGISKFRPVTIINAKEPKRLDLKIEVPVEDMARL
GQIEELPSGAASQGPKRTSIWSAIHPRLLEIVRSRTSTLIFVNSRRIAERLAGALNELAG
ETLARAHHGSLAASQRSEIEEMLKAGGIKALVATSSLELGIDMGAVDLVIQIEAPPSVAS
GMQRIGRAGHHVGASSEGIIFPKYRADLVACAAVTRAMHEGLVESTRFLRNPLDVLAQQM
VAIVAQPPALSRVKRKRGEPPPEAEMGVEELFDIVRGAAPFAGLSRMAFEGVLDLLAGRY
PSDEFAELRPRVTWDRVRNVVTPRQGTKLLAIVNGGTIPDRGLYGVFLSGSETKPIRVGE
LDEEMVFESRTGDTFILGASTWRIDEITHDRVLVSPAPGQPGKMPFWHGDSAGRPLEFGR
RIGALVREIRELPHNAAISRLTREHDLDPVAAENLIRYLADQEVATFTVPDDRNIVIERC
RDELGDWRVCVLTPFGSRIHAPWAMAVTGRIRAAGGPEVETMWADDGFVLRFPGTDDPPD
SDILLLDPAEAMDLVLRQLGSTALFAAKFREGAARALLLPRRRAQGRAPLWQQRKRAYDL
LAVAARYPAFPMLLEAYRECMRDVFDMPAFLETLRAIANRQLRVHVVDSKTPSPFASALL
FSYVANYIYDGDAPLAERRAQALSIDQEQLRDLLGDADLRELLDADAIAEVEEQLQALTE
TTRARSADAIHDLLLRLGDLSREELARRVASPSLLEHLTRLLRARRLLEVKIAGDKRLIA
IEDAGRYRDALGVPLPPGIPTSLLGPVVTPVLELVRRFARTHGPFTLQEASSRFGLGNEQ
TEAALRSLLLDGRIVEGGFRPGGVHREWCDAEVLRLIRRKSLARLRKEIEPVEQQMFARL
ETHWQGVLQPRRGLDALLDAIENLQGAPLPASILESSILPARLTNYSPNDLDTLIAAGEV
VWCGLEPLGERDGRIALYLSDKLSILLPPRILVNDPDHPLSDREEALLGELGRSGATFFS
QLHEAVGGGYPGETLDALWSLVWRGLITNDTFHALRAYTTKPAAAKPAKRQHNVQTFRSR
RTTPPSAQGRWALLPIAEAAPGAQEQTNWSHAIALQLLNRYGIVTRESVSQENLPGGFSA
VYDVLKALEESGRIRRGYFIDGLGATQFALPAAVDLLRSLRNNVQADRSELVTMAATDTA
NAYGSVLRWPVVAEDPETSEQANRSLTRSVGASVILRNGDLIAYLRRNNPNLQVFLPAEE
PDRSNAARDLAQFLSANGQREMRQQAADHRAGMLITTINGQPAHLHLMSRHLQDAGFRAA
PLGLNLRRVLLPPPGSEAIPAETQ
NT seq 4755 nt   +upstreamnt  +downstreamnt
atggacccagccggcaacgcagttgcaaaggacctcccagaagaccctggcgcggtgctg
gacctcttccaccccgtcactgccaaatggtttcgcgcagtcttcgaccaaccgacggcc
ccgcagcggcaaggatggcccgccatcgcgcgcggtgaaaacacccttatttttgcgcct
accggaaccggcaagacgctcaccgccttcctctggtgtctcgaccgcttgatgctgcac
ccgcccaaggatgaagaagaggcctgccgggtcatttacatcagccccttgaaggcgctg
gcggtcgacgtggaacgcaatctccgctcaccgcttgctggcatcgctaacatggcagcc
cgagagggtattcccttccgccagccggaaatcagtgtccggaccggcgacacttcccag
aaggagcgtgggctgtttaaacgccatcccgccgagatactcattactacgccggagtcg
ctctatttgctgttgacttctgaggcggccgccagcctgcgcgcggtcgacacggtgatc
atcgatgagattcacgccctggtcccgaccaagcgcggcgcgcacctggccttgtctctc
gaacgtcttcaggccgtcacttcacagccgctgcagaggatcggcctgtctgccacccag
cggccgctcgaagaggttgcccacttcctcgccggggccactatcaacccggccggcgac
gagtccaatggcgagaacctgctggcgcagatggaggaggagtattcctcgacacaagac
gacatcgcggcagagcggacaggaatcagcaaattccgtccggtcacgatcatcaacgcc
aaagagcccaaacggctggacctcaagattgaagtgcccgtcgaagacatggcgcgactt
ggccagatcgaagagttgcccagcggcgctgcttcgcaaggcccgaagcgcacctcgatc
tggagcgcgattcacccccgattgctggagattgtgcgctcccgcacctcgacactgatc
ttcgtcaacagccgccgcatcgccgaacgccttgccggagcgcttaacgaacttgcaggc
gagaccctggcccgggcccatcatggctcgctagccgcctcgcagcgctccgagattgag
gagatgcttaaagcgggaggcatcaaggctctggtcgccacctcatcgctcgaacttggc
atcgatatgggtgcggttgatctagtcatccagatcgaggcgccgccgtcggtcgcgagc
ggcatgcaaaggatcggacgtgccggccaccacgtaggcgcatcgagcgaaggcatcatc
ttcccgaaataccgagccgacctggtcgcatgtgccgcggtaacccgcgccatgcacgag
ggattggtcgagtcgacccgcttcctgcgcaatccgcttgacgtactcgcgcaacagatg
gtcgctatcgtcgcgcaaccgccggctctcagccgcgtgaaacgcaaacgaggggagccg
ccaccggaagccgaaatgggcgtcgaggagctcttcgacatcgtacgcggggccgctcca
tttgcgggactgagccggatggccttcgaaggagtactcgacctgcttgccggccgttat
ccgtcggacgagtttgccgagcttcgtccgcgcgtcacctgggaccgggtccggaacgtt
gtcaccccgcgccagggaacgaaactgctggcgatcgtcaatggcggcaccatccccgat
aggggcctttacggcgtcttcctctccggatcggagaccaagccgattcgagttggggag
ctcgatgaagagatggtctttgagagccgcactggagacaccttcatcctcggagcatcg
acctggcgcatcgatgaaatcacccatgatcgcgttctggtttcgcctgctcccggacaa
ccgggcaagatgcccttctggcatggcgactctgctggacgcccgctcgagtttggccgc
cgcatcggcgccctggtgagggaaattcgcgagctcccgcacaatgccgcgatcagccgc
ctgacccgggaacacgatctcgatccggtcgccgccgagaaccttatccgctatctcgct
gatcaggaggtggcgacttttaccgtgccggacgatcgcaacatcgtgattgaacgctgc
cgcgacgagctcggcgattggcgagtctgcgtcctgacaccttttggcagccggattcac
gctccctgggcgatggcggtaaccggaaggatccgcgcggctggcggacccgaggtcgaa
acgatgtgggccgacgacgggttcgtcctgcgcttcccaggcactgacgatcctcctgac
tccgacattctgttgctcgacccggcggaggccatggacctcgtgctgcgtcaactcggt
tcgacggcgctcttcgccgccaagttccgtgagggcgccgcgcgcgccctgctgctgcct
cggcgacgcgcccagggtcgcgccccgctctggcagcaacgcaagcgagcctatgatctg
ctcgcggtggccgctcgctacccggcgttcccgatgctgcttgaggcgtatcgcgagtgc
atgcgcgatgtcttcgatatgcccgcgtttcttgagacgctgcgcgcaatagctaatcgc
cagctgcgcgtgcatgttgtggattcaaagacgccatcgccatttgcctctgctttgctc
ttcagctatgtcgccaattacatctatgacggggatgctcccctcgccgagaggcgcgcc
caggcgctgtcgatcgaccaggagcaattgcgcgacttgctgggcgacgccgacctccgg
gaattgctcgatgccgacgctatcgctgaagtagaagagcagctgcaggcactgaccgaa
acgacgcgagcgcgctctgccgacgctatccacgatttgcttttacgcctcggcgacctc
tcgcgcgaagagctcgcccggcgtgtcgcatcccccagcctgctcgagcatctcacccgg
ctgctgcgagcgcgccggcttctggaggtcaagatagcgggggacaagcgactcatcgcc
atcgaagatgcgggtcgctaccgggacgctctcggcgtgcctctgcccccgggaattcca
acttcgctgcttgggccagtagtcacgccggtgctcgaactggtgagacgtttcgcccgc
actcacggtcctttcactctgcaagaagcatcctctcggttcggcctcggcaacgaacag
accgaagccgccctgcgctcgctattgctcgatgggcgcattgttgaaggcggttttcgt
cctggcggcgtccatcgcgaatggtgcgatgccgaggtgctgaggctcattcgcagaaag
tcactggcgcggttacgtaaagagatcgagccagtggagcagcagatgtttgcgcgtctg
gagacgcattggcagggagttttgcaaccccggcgcggcctcgatgcgcttctcgacgcg
atcgaaaatctgcagggcgcgcctttacccgcgtcgatcctcgaatcatcgatcctgccg
gcgcggctgaccaattactcgcccaatgatctagatactttgatcgccgccggtgaagtg
gtgtggtgcgggctagagcctctcggtgagcgcgatggccgcattgcgctctatctctcc
gataagctgtcaatcctgctgccccctcgcatcctggtcaacgaccctgatcacccactg
agcgaccgtgaagaggccctgctgggggagctcggccgcagcggggccaccttcttctca
cagctgcatgaagcagtgggcggaggatatccgggtgagaccctcgatgctttgtggtct
ctggtctggcgtgggttgatcaccaacgacaccttccatgctctgcgcgcttacacaaca
aagccggccgccgccaagccagcaaagcgccagcacaatgttcagacctttcgctcgcga
aggacgactccgccgagtgcgcaaggccgttgggcgcttctgccgatcgcagaagcggca
ccgggcgcacaagagcaaaccaattggagtcatgcgattgctttacagcttctcaatcga
tacggcatcgtgacccgcgagtcggtctcgcaggaaaatctccccggcggcttcagcgcc
gtctacgacgtcctgaaggcgcttgaggagagtggccgcattcgtcgcggctactttatc
gatggtctgggagccacccagttcgcgctgccggcagcggtcgatctgctgcgctcactg
cgcaacaacgttcaggccgatcgttccgagcttgtaaccatggctgcgacagataccgca
aatgcctatggatcggtcttgcgctggccggtggtcgccgaagatcccgagacttccgag
caagcaaaccgctccctgacgcgcagtgttggcgcgagcgtcatactgcggaacggagac
ctgatcgcttatcttcgccgcaacaatcccaatctccaggtatttctccccgccgaggag
ccggaccgcagcaatgccgcaagagacctggcacagttcctctccgccaacggacagcgg
gagatgaggcagcaggcggcggaccaccgcgctgggatgctgatcaccaccatcaatgga
cagcctgcgcaccttcacctcatgtcgaggcacttgcaggatgccggctttcgggcggcc
ccactaggactcaacctgcgcagagtgttgttgccgcccccaggctcggaagccattccg
gcggagacacaataa

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