Acidisarcina polymorpha: ACPOL_2534
Help
Entry
ACPOL_2534 CDS
T05576
Name
(GenBank) ATP-dependent DNA helicase pcrA
Organism
abas
Acidisarcina polymorpha
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_22
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXC11854
UniProt:
A0A2Z5FZ92
LinkDB
All DBs
Position
complement(2730567..2734127)
Genome browser
AA seq
1186 aa
AA seq
DB search
MTRASKTILLDQEARDQALDTTRSILVQAPAGSGKTELLTMRFLKLLAMVEEPEQVLAIT
FTKAATAEMRHRILSKLEQVRSNEALSSEDFQAVALARAALANSNQRGWRLLEQSQRLNI
QTIDSLCLGIAHQMPLTARLSGTLEPTENAQPLYRDAARRTLDQLGGSDVELNAALTSLL
TLRDSNLRDCESLLTGMLGTRDQWMRAFPLAGEIDWEQARVKLEAPLQREIGKVLNEAHA
LLSSHPMMTAELLELADYACNSTELKIDIKLLAGLQELPGVSAEFIQHWHCLCDLLLTNE
GQPRKRYDITTGFPPKKNNAKQRMNLLVGDLTKIPRLHGLLVDIRNLPPARYSEQQWKTL
RSMFTALRHAAVELNSVFAERGSVDFVEIGMAARAVLLGIGAEGLPSDRGTQIHHLLIDE
FQDTSRRQHELIALLLQSWTADAEDGRTFFLVGDPMQSIYMFRQADVELFDLVRRQGLNT
GKRMLPVKDLHLQTNFRSSAGIVKPLNSIFKIIFPHNANAEAAAVDFLPGVAKNMNQSPG
AYQVHPDYVESAKNLQGDDADEDDRSLHAGEADQGETSRVLEIIHRHLPTIEAAQRDGKE
FTVAVLARAKNHLIHIAAALREQQIPFRAIELENLGGRQEILDLQSLTRALLHPMDRIAW
LALLRAPWCALELREIHLLCGTDDRQRMEASVARQIEERICLLTEEAQRRVSRLTSVLQT
ALRSRYSQTSFASWIERTWRSLGGAACVDVTGYENALAYFRMLERVSPDGIGAMGEEFSD
QLNRLFARPDPETSERCGIQLMTIHKAKGLGFNVVLLPGLHKRAQRDAPSLIRYLERTTG
EGIELLAAPIDSKGEDTSALNRWVQLQRDNREAEERKRLLYVACTRAREELHLFGTATVT
NSTLSSKPGTLLNTAWPALEPVFVSRRPLPVAEPIQGILAFPPPASSSSILSAIAAGAAV
STIQRLPANWSRQTFLSNVTKTVSNTAVTADVPVQDQRRPQGARSSRTLGTVVHALFERS
ISLRRSGLPGSQLLAGSPRLYEQALGLARHEGLTPGDAEACAKLSMKALRFALEDEEGVW
ILTPRDEDGVESSWTGLVDGVARTLRIDRFFRAGAEPLSEGSDCLWIIDYKTAAPNVSGF
LDEEQLIYREQLESYGRMMRLAHGDEVKLRLGLYYPLLKKLLWWAA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagcgagtaaaacaatcctcctcgaccaggaggcccgcgatcaggcgctggat
acgacccgttcgattctcgtccaggcccccgcgggctcgggcaaaaccgagcttctgacc
atgcgcttccttaaattgctcgccatggtcgaggaaccggagcaggtgcttgcgatcacc
ttcaccaaggctgcgactgccgagatgcggcatcgaattctaagcaagctcgagcaggta
aggagcaacgaagccttgtcttcagaggactttcaggcagtggcgctcgcacgggccgcg
ctcgccaactccaaccagcgaggctggcgcttgctcgaacaatcgcagcggctcaacatc
cagaccatcgactcgctctgcctcggtatcgcccaccagatgccactcacggccaggctc
agcggaacactcgagccgaccgagaatgcacaaccactttaccgggatgctgcacgccgg
acgctcgaccaactcggtggaagtgatgtcgaactcaacgccgcgcttacctcgctgctt
accctgcgtgacagtaatcttcgtgactgcgagtcgttgctgaccggcatgctcggcacc
cgggaccaatggatgcgggcctttcctctggccggcgaaatcgattgggagcaagcaagg
gtcaagcttgaagcgccgcttcaacgagagatcggtaaggtgctcaacgaggcccatgct
ctgctctcctcgcacccaatgatgaccgccgagctattagagcttgcagattacgcctgc
aatagcacggaattgaagatcgatatcaagttgctggcggggcttcaggaacttcctggc
gtgtccgcagaattcatccagcattggcattgcttatgcgatctgttgcttaccaacgaa
ggtcaaccgcgcaaacgctacgacattaccaccggcttcccacccaagaagaataacgcg
aagcagcgcatgaatcttttggtgggcgacctcaccaagatcccgcggctacacggtctg
ctcgtcgatattcgcaacctcccacctgcccgctattcagagcagcaatggaagacgctg
cgctccatgtttacggcgcttcgccatgcagctgttgagttgaactctgtctttgccgag
agaggctcggttgatttcgtcgagattggaatggctgcccgcgcggtcctgctcggcatt
ggcgccgagggcctgccgagcgatcggggcacacaaatacatcatttgctgatcgacgag
tttcaagatacctctcgccgccaacacgaattaattgcgttgctccttcaaagttggaca
gccgatgcggaagatggacgtacctttttccttgttggcgatccgatgcagtccatctat
atgtttcgccaggcagacgtagagctttttgacctcgtccgcagacaagggctcaacacc
ggcaaacggatgctcccggtgaaggatctccatctccagaccaacttccgctccagtgcc
ggcatcgtcaagccactcaactcgatcttcaaaatcatctttcctcataacgccaacgcc
gaagcagccgctgtcgattttcttcctggtgtggccaaaaatatgaaccagtctccaggc
gcctaccaggtccatcctgactatgtagagtccgcaaagaacttgcaaggagatgacgcc
gacgaggacgatcgctcacttcatgcaggtgaagctgatcaaggagagacatcaagagtt
ttggagatcatccaccgccaccttccaacgattgaggcggcccagcgtgacggcaaagaa
ttcaccgttgcggtgcttgcgcgagccaagaaccacctgatccacatcgccgctgcgctt
cgagagcagcagattccctttcgcgcgatcgaacttgagaacctgggtggccggcaagag
atcctcgatctgcagtccctcactcgtgctctactccatccgatggaccgcatcgcttgg
cttgccttgttgcgtgcgccctggtgcgcgcttgagctgcgcgagatccatttgctgtgt
ggaacggatgaccggcagcgcatggaagcgagcgtcgcccggcagatcgaagagcgcatt
tgtcttctaacggaagaggcgcaacggcgtgtcagccgacttacttccgtacttcagaca
gcgcttcgttcccggtacagccagacgtcgtttgcatcctggatcgagagaacgtggcgg
agccttggtggagccgcctgcgtcgatgtcacgggatatgaaaatgccctcgcctatttt
cggatgttagagagagtctccccggatggtatcggtgcgatgggcgaggagttcagcgat
caattgaatcggctcttcgccagaccggatcccgagacaagcgagcgatgcgggattcag
ctcatgacgatccacaaggcaaaaggactgggcttcaacgtagtcctgctgcccggattg
cacaagagggcgcagcgtgatgctccgtcgttgatccgctacctcgaacggacaaccggt
gagggtatcgaattattggccgcacccatcgacagcaaaggcgaagacacctcggcattg
aaccgctgggtgcagctccaacgagacaaccgggaggccgaggagcgcaagcgtttgctg
tatgttgcttgcacccgggcgcgagaggagcttcatctttttggcaccgcgacggtgacg
aattcaactctgagcagtaagccaggcactctgctgaacacggcatggcccgctttggag
cctgttttcgtcagtcggcgccccctgcctgtggctgaaccaatacagggcatactcgct
tttcctccgcctgcatcctcgtccagcattctgagtgcgatcgcggcaggggcggctgtt
tccacgatccaacgcttaccggcgaactggagcagacagacctttctttcgaatgtaaca
aagactgtgtcgaatacagcagtcacggcggacgtacctgttcaagatcaaagacgaccc
cagggggcaagatcatcgaggacgctcggcacggtggttcacgccctttttgaacgatcg
atcagcttacgtcgatcgggacttcccggaagtcaattgctggctggttccccccgtctc
tacgaacaagcactcggtttggcgcgtcacgaaggactgactccgggagatgcggaggct
tgcgcgaagctgagcatgaaggcgcttcgattcgcgctcgaagatgaggaaggagtgtgg
atcttgactcctcgtgacgaggatggcgtcgagagctcatggacgggcttggtggatgga
gtcgcgcggacgcttcgaattgaccggttttttcgagctggggcagaaccgctgagcgaa
ggtagcgattgcctgtggatcatcgattacaagaccgccgcccccaacgtttcggggttt
ctcgacgaggagcaactgatctatagagaacaactggagagctatggccgaatgatgcgc
ctcgctcatggcgatgaggtgaaacttcgccttgggctttactatccccttctgaagaag
ctgctatggtgggcggcctga
DBGET
integrated database retrieval system
