Acidisarcina polymorpha: ACPOL_3835
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Entry
ACPOL_3835 CDS
T05576
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abas
Acidisarcina polymorpha
Pathway
abas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACPOL_3835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abas03021
]
ACPOL_3835
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_3835
Enzymes [BR:
abas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACPOL_3835
Transcription machinery [BR:
abas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACPOL_3835
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACPOL_3835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DZR
Zf_1st_IFT121
RnfC_N
Zn_Ribbon_1
DZR_2
DUF7577
Motif
Other DBs
NCBI-ProteinID:
AXC13114
UniProt:
A0A2Z5G2T3
LinkDB
All DBs
Position
4102867..4107345
Genome browser
AA seq
1492 aa
AA seq
DB search
MPNENRALRSRLDFSKIPTAIQIPNLIEVQRRSYERFLQMDKLPSEREDNGLQSVFTSVF
PITDFRNISQLDFVDFSIGNWECKCGHLKGLHHLRTTCVHCGAMVITDPFHPGDVLCHKC
GTYNKNTPDFCNKCGDPVGLQLKYDQSECEERGMTYSAPLKVTVRLTIYDKDAETGAKSI
RDIKEQEVFFGDIPLMTQNGTFIVNGTERVIVSQLHRSPGVFFETANNRTYFLGKIIPYR
GSWVEFEYDQKNTLYVRIDRKRKFLGTIFLRALGLKTDEEILKTFYTVDTITVQEGKLHW
RISEDATKPTHLLGAKPAHAVVINGEEIAHSGRKITPSILKALRSKVASVEVEASELDAA
VTAADVVDTTTGEVIVEANLELTSERLHRITESGVTSIEVFFPERDDVGNIITNTLRRDS
VRKPEEALIEIYRKLRPGDPPTLDTATALFEGMFFDPRKYDFSRVGRLKFNIKLYENQDA
GGLDKRTLTPEDFYGTIRYLLKLRKNIGVVDDIDHLGNRRVRAVGELMENQFRIGLVRME
RAIKEKMSVYQEMSTAMPHDLINAKPVMAAIREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLSRERAGFEVRDVHPTHYGRICPIETPEGPNIGLISSLSCFARINEYGFIESPY
RRVRDGQVLDYVQVANAGESGLRVGDHLEKGEARQLNEKLKAEGKRGLDVEAFSFYLSAW
EEDRHTIAQANIELDENLKITEELVNARRTGNFVLVNRSEVDYVDVSPKQLVSVAASLVP
FLEHDDANRALMGANMQRQSVPLLVAEAPLVGTGMEGVTARDSGAVILARRNGFVDSVDS
ERIIIRVEGEHHPTQLSREVGSDIYQLTKFKRSNQNTCINQKPIVRHGDRVVKGQVIADG
PCTEQGELALGRNVLVGFMPWRGYNFEDAILISEKLVREDYYTSVHIEEFEIEARDTKLG
PEEITRDIPNVSENALRDLDESGIIRIGAKIKHNDILVGKVTPKGETQLTPEEKLLRAIF
GEKAGDVRDASLTCPPGIEGTVVDVRIFSRKGQEKDERAKMIEADQIAKLEKNLADEIRI
LTDERLKRLDAILGGKTVLADLHDERTNKRLLVKDAILDRDAIERISTKNLKRIRYSDKD
PRVNEQIDEIEEMTSRQIDVLRKITNERIAKLQKGDELAPGVIKLVKVYIAMKRKLSVGD
KMAGRHGNKGVIARILPEEDMPYLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAAHEL
GVKIAEIVEKNQEANAIREAVKEGFAGTATLQLLLDLDDDMLIRVTKGMKRGIWFGTAVF
DGAREEEIKALLASAGLPSSGKSHLFDGMTGEQFEQPVTVGYIYMLKLSHLVDDKIHARS
IGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYILQELLTAKSDDVYGRTKIYEA
IVKGEAAIEPGVPESFNVLIRELQSLCLDVELIKQIDGKKVLVPVPAIAAAD
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgagaatcgcgcccttcgtagccgtctcgatttttccaaaatcccaactgcc
atccagattcctaacctgatcgaagtccagcgccgctcctatgagcgctttctacaaatg
gacaagctgccctccgagcgcgaagacaatgggcttcagtccgtcttcacctcggttttt
cccatcaccgactttcgcaatatctcacaactcgactttgtggatttctccataggcaac
tgggagtgtaagtgcggccatttgaaaggtctgcaccaccttcgtactacttgcgttcat
tgcggagccatggtcatcaccgacccgttccaccctggcgacgtgctttgccacaagtgc
ggcacctataacaagaacacgcctgacttctgcaataagtgcggcgatccggttggcctg
cagttgaagtatgaccagtccgaatgcgaagagcgcggcatgacctactctgctcccctg
aaagtcacggtccggctgactatctatgacaaggatgcggagaccggcgccaagtcgatc
cgggatatcaaggagcaggaggttttcttcggcgacattccgttgatgacccagaacggc
accttcattgtcaatggcaccgagcgcgtcattgtctcgcagttgcatcgttcgcccggc
gtcttctttgagaccgccaacaaccggacttatttcctcggcaagatcattccataccgc
gggtcgtgggtcgagtttgagtacgatcagaagaacacgctctacgtccgcatcgaccgt
aagcgcaagttcctgggcaccatcttcctgcgtgctctcggcctgaagactgatgaggaa
atcctcaagaccttctacaccgttgacaccatcacggtgcaggaaggcaagctgcactgg
aggatctccgaagacgccaccaagccgacccacctgcttggcgcgaagccggcgcacgct
gtcgtcatcaatggcgaagaaatcgcccactccggccgcaagattacgcccagcatcctc
aaggccctgcgctccaaggtggccagcgtcgaggttgaagcttccgaattggacgccgcc
gtcaccgctgctgacgtggtcgataccaccaccggcgaggtgatcgtcgaagccaatctc
gagctgacctccgagcgcctgcaccgcatcacggaaagcggcgtaacctcgatcgaggtc
ttcttccccgagcgcgacgatgtgggcaacatcatcaccaataccctccgccgcgactca
gtccgcaagccggaagaggcgctgatcgagatctaccgcaagctgcgtcccggcgatccg
ccgactttggatacagccacggcgcttttcgaaggcatgttcttcgatccgcgcaaatac
gacttctcccgcgtcggccggctgaagttcaacatcaagctctatgagaaccaggatgcc
ggtggcctcgacaagcgcactctgactcccgaagatttctatgggacgatccgctacctg
ctcaagctgcgcaagaacatcggcgtcgtcgatgacatcgatcaccttggcaaccgccgc
gttcgggccgtcggcgagctgatggagaaccagttccgtatcggcctcgtccgcatggag
cgcgccatcaaggaaaagatgagcgtctatcaggaaatgtcgacggccatgccgcatgac
ctgatcaacgccaagccggtgatggccgcaatccgcgagttcttcggttcctcgcagctt
tcgcagtttatggaccagaccaacccgctgtcggagatcacgcacaagcgccgtctctcc
gcccttgggcctggcggtctgagccgcgaacgcgcaggcttcgaagtccgcgacgttcac
ccgacccactatggccgtatctgcccgatcgagaccccggaaggtccgaacatcggtctg
atcagctcgctgtcgtgtttcgctcgcattaacgagtacgggttcatcgagtcgccctat
cgccgcgttcgtgacggtcaggtgctcgactatgtccaggtcgcgaatgccggcgagagc
ggccttcgcgtcggcgatcacctggaaaagggcgaagcccgtcagctcaatgagaagctc
aaggctgaaggcaagcgcggcctcgatgttgaagccttctccttctacctttccgcatgg
gaagaggatcgccacacgatcgctcaggccaacatcgaactcgacgagaaccttaagatc
accgaagagctggtcaatgcccgccgcaccggcaacttcgtgctcgtcaatcggtcggag
gtcgattatgtcgacgtcagcccgaagcagctcgtctcggtcgccgcttcgctcgtgccg
ttcctcgagcacgatgatgcgaaccgtgcactgatgggtgcgaacatgcagcgtcagtcc
gtgccgctgctcgtcgccgaggctccgctggtcgggaccggtatggaaggtgtgaccgcc
cgcgactccggcgccgtcatccttgcccgccgtaacggctttgtggattcggtcgattca
gagcgcatcatcatccgcgtcgagggcgaacatcaccccacgcagttgtcgcgtgaagtt
ggttcggatatttatcagctgaccaagttcaagcgctccaaccagaacacctgcatcaac
cagaagccgatcgttcgtcacggcgaccgggtggtgaagggccaagtcattgcggacggt
ccctgcaccgaacaaggcgaactcgctctcgggcgcaacgtgctcgtcggcttcatgccc
tggcgcggttacaacttcgaggacgcgatcctgatctccgagaagctggtacgtgaggac
tattacacctccgtccacatcgaggagttcgagattgaagcccgcgacaccaagctcggg
ccggaagagatcacgcgcgacattcccaacgtctctgagaatgcgctgcgcgatctcgac
gaaagcggcatcatccgcatcggcgccaagatcaagcacaacgacatcctggtcgggaag
gtgacgcctaagggcgaaactcagctgactccggaagagaagctgttgcgcgcgatcttc
ggtgaaaaggccggcgacgttcgcgatgcctcgctgacttgccctccgggaatcgaaggc
accgtggtcgatgtccgcatcttctcccgcaagggtcaggaaaaggacgagcgcgccaag
atgatcgaagccgatcaaattgccaagctggagaagaaccttgccgatgagattcgaatc
ctcaccgacgagcggctgaagcgtctcgatgcaatcctcggcggcaagacggtcttggcc
gaccttcacgatgagcgcaccaacaagcgtctcctggtgaaggatgcgatcctcgaccgc
gacgcgatcgagcgcatctcgaccaagaacctgaagcgcatccgctatagcgacaaggat
ccgcgagtcaacgagcagatcgatgagatcgaagagatgacttcgcggcagatcgacgtg
cttcgcaagatcaccaacgagcgcatcgccaagctgcagaagggcgacgaactggccccc
ggcgtcatcaagctggtcaaggtctacatcgccatgaagcgcaagctctcggttggtgac
aagatggcaggtcgtcacggcaacaagggcgtcatcgctcgcatcctgccggaagaggac
atgccgtatctgccggatggcaccccggtcgaaattgttctcaacccgctcggtgttcct
tcgcgtatgaacgttggtcagatcctcgagactcacctcggctgggctgctcacgaactc
ggtgtcaagattgctgagatcgtcgagaaaaatcaggaagcaaatgccattcgcgaagca
gtcaaagagggctttgccggcaccgcgaccttgcagctgcttctcgacctcgatgatgac
atgttgattcgcgtcaccaagggtatgaagcgcggcatctggttcggcaccgcggtcttt
gacggtgcccgtgaagaagagatcaaggcgctgctggcctcggctggtctgccgagctcc
ggcaagtcgcatctcttcgacggcatgaccggtgagcagttcgaacagccggtcaccgtc
ggctacatctacatgttgaagctctcgcacctggtcgacgacaagatccacgctcgctcg
atcggaccgtactcgctcatcacccagcagccgctgggcggcaaggcgcagttcggtggc
cagcgcttcggcgagatggaagtctgggcgctcgaagcgtacggcgctgcctacatcctg
caggagttgctcactgccaagtccgacgacgtttacggccgtaccaagatctatgaggcc
atcgtcaagggcgaagcggcgatcgaacccggcgtaccagagtccttcaacgtgctcatc
cgcgaactgcagtcgctctgcctcgatgtggaactcatcaagcagatcgatggcaagaag
gtgctcgtgcccgttcctgcgatcgcagcagccgactaa
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integrated database retrieval system
