Acidisarcina polymorpha: ACPOL_3836
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Entry
ACPOL_3836 CDS
T05576
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
abas
Acidisarcina polymorpha
Pathway
abas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACPOL_3836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abas03021
]
ACPOL_3836
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_3836
Enzymes [BR:
abas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACPOL_3836
Transcription machinery [BR:
abas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACPOL_3836
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACPOL_3836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AXC13115
UniProt:
A0A2Z5G3B1
LinkDB
All DBs
Position
4107547..4111737
Genome browser
AA seq
1396 aa
AA seq
DB search
MYRSSPFELTSPITDFDAIKISLASPEKIRSWSHGEVTKPETINYRTFKPERDGLFCARI
FGPVTDWECLCGKYKRMKHRGVICDKCGVEVTLSKVRRERLGHIELASPCSHVWFFKGLP
SRIGHLLDISLRDLESVLYFESYVVVDAGDAPVKEREIIKDEVRFRELDQQYRPGGFKGM
MGAEAIKELLKRVNVDELSIELRERMKVETSLQKRLKYAKRLKVTEAFRKSTNKPQWMIL
DVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMDLHAPEVIVRNEKRML
QEAVDALFDNGRRGRVLRGANNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYHRLEQTGHCTTIKQAKELVELQDPIVWDILEEVIKDH
PVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQVE
ASVLMLASHNILSPASGQPITVPTQDLVLGLYYLTKVKKGGKGEGRVFANTEEVLMALEA
KEVETLTPIRLRYTGPVLDMTTAYDDQDLTHTEPVHYEKQYITTTVGRAILNDSLPDGMP
YVNGLLKKKGIGQLVNYCYLNLGLEVTVKMLDRIKELGFAYATRSGLSVGLDDMVIPDSK
YTVVREAEKTVIAIQQQYLDGAITNGERNNKVIQIWSAVTERVADEMFNNMKNADKEGAM
NPIYIMADSGARGSKQQIRQLSGMRGLMAKPSGEIIEQPITANFREGLTVLQYFISTHGA
RKGLADTALKTADSGYLTRRLVDVAQDVIVTEPDCGTVEGIYVGPIVESGEIIEPLRDRI
VGRVSLERLKDFEGQVIVEVNQEITEDIASAIQAAGIEKVRIRSVLTCESRRGVCVLCYG
RNLASGRLVELGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRVNEQSRLDAKNNGFVRF
INMVTVRSKGGDLVAMNRSGSIAVVDDRGREKERYQVVYGAKLKVEDGAAVKLGQAMAEW
DPYTFAILTEIGGTIQFKDLQEGITLNEEVDEVTGLSRLVVSDAADEKRQPAIVIKGAKG
NKRYLMPSRSHLMIQDGDEVFPGDILAKIPRETTRTKDITGGLPRVVELFEARKPRETAI
ISEIDGTVKFGEVSKGQRKIYVTADNGEEKEYSVPRGVHINVQEGERMRAGEPLMDGPLN
PHDILAVLGEKELQGYLVNEIQEVYRLQGVTISDKHIETIVRQMLRWVKIEEVGDTSFLL
EQQVDKFRFREENDRVIAEGGRPCVGRPLLLGITKASLSTDSFISAASFQETTRVLTEAS
INGAIDNLRGLKENVIVGRLIPAGTGMEYYRNIQLSPELEEAAAKVQQEVTAAFEEAERE
LELMRQEGEAEEMAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccgttccagcccattcgaactcaccagcccgatcaccgacttcgacgctatcaag
atcagccttgcatccccagaaaagattcgcagctggtcgcacggcgaggtcaccaagccc
gaaaccatcaactaccgcaccttcaagccggagcgtgacggactcttctgcgcccgcatc
tttggcccggtcaccgactgggaatgcctctgcggcaagtacaagcgcatgaagcatcgc
ggcgtcatctgcgacaagtgcggtgttgaagtcactctctccaaggtccgccgcgagcgt
ctcggccacatcgagttggcttcgccctgctcgcacgtctggttcttcaagggactgccg
tcccgtatcggccacttgctcgacatctcgctgcgcgatctcgaaagcgttctttacttc
gagagctacgtcgttgtcgacgccggcgatgcgccggtgaaagagcgggagatcatcaag
gacgaagtccgcttccgcgaactcgatcagcaataccgccccggcggctttaagggcatg
atgggcgccgaggccatcaaggaactgctgaagcgcgtcaatgtcgacgagctctcgatc
gaactccgcgagcggatgaaggtcgaaacctcgctccagaagcgcctcaaatacgccaag
cgtctcaaggtcaccgaggcattccgcaagtcgaccaacaagccgcagtggatgatcctc
gacgtgatcccggtcattccgccggagcttcgcccgctggtaccgctcgatggcggccgc
ttcgcgacctccgatctgaacgatctctatcgtcgcgtaatcaaccgcaacaaccgcctc
aagaagctcatggacctccatgcgcctgaggtcatcgtccgcaacgaaaagcgcatgctg
caggaagccgtcgacgctctcttcgacaacggccgtcgcggccgtgtgttgcgtggcgcc
aacaaccgtccgctgaagtcgctctccgacaccctcaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgactactccggccgctcggtcatcgtcgttggtccg
gaactcaagctccaccagtgcggacttccgaagaagatggcgctcgagctattcaagcca
tttatctatcaccgtctcgaacagaccggccactgcacgaccatcaagcaggctaaggaa
ctggtcgagctccaggacccgattgtctgggacatccttgaagaagtcatcaaggaccac
ccggtgctgctcaaccgtgccccgactcttcaccgccttggcatccaggcgtttgagccg
gtgctcgtcgaaggcaaggccatcaagatccacccgctcgtttgtaccgccttcaacgcc
gacttcgacggcgatcaaatggcagtccacatcccgctgtcgcccgaggcccaggtcgaa
gccagcgtactcatgctcgcttcgcacaacatcctctcgccggcatccggtcagccgatc
acggtgcccactcaggatctcgtcctcggtctctactatctgaccaaggtcaagaagggt
ggcaagggagaaggccgcgtcttcgccaacaccgaagaagtgctgatggcgcttgaagcc
aaggaagtcgaaacgctgacgccgatccgcctacgctataccggtccggtgctcgacatg
acgaccgcctatgacgatcaggacctcacccataccgagccggtccactatgagaagcag
tacatcaccactacggttggccgtgcgatcctcaacgattcgcttcccgacggcatgccg
tacgtcaacggcctgctcaaaaagaagggcatcggccagctcgtcaactactgttacttg
aatctcggtcttgaggtgaccgtcaagatgctcgaccgcatcaaggagctcggcttcgct
tacgcgacccgcagcggcttgtcggtgggcctcgacgacatggtcattccggattcgaaa
tacaccgtcgtccgtgaggcggaaaagaccgtcatcgccatccagcagcagtatctcgat
ggcgcgatcaccaacggcgaacgcaacaacaaggtcatccagatctggtctgcggtcacc
gaacgcgtcgccgacgagatgttcaacaacatgaagaacgccgacaaagagggagccatg
aacccgatctacatcatggccgactccggcgctcgtggttcgaagcagcagattcgtcag
ctctccggcatgcgcggcctgatggccaagccttccggcgaaatcatcgagcagccgatc
accgcgaatttccgcgaaggccttaccgtgctgcaatacttcatctcgacccacggcgcg
cgtaagggcctcgccgatactgcattgaagactgctgactctggctacctgacccgtcgt
ctcgtcgacgttgcgcaggacgtcatcgtcaccgagcccgattgcggcaccgtcgaaggc
atctacgtcggtccgatcgtcgaatccggcgagatcatcgaaccgttgcgcgaccgcatc
gtcggccgcgtctcgctcgagcgtctcaaggacttcgagggtcaggtcatcgttgaggtc
aaccaggagatcaccgaagacattgcttccgccattcaggcagccggcattgaaaaggtg
cgtatccgctcggtgcttacctgcgaatcccgtcgcggcgtttgcgtgctctgctacgga
cgcaatctcgcctccggccgtctcgtcgaactcggcgaagccgtcggtgtcatcgccgct
cagtcgatcggcgagccgggaacccagctcaccatgcgtaccttccacatcggcggtacc
gcatcgcgagtgaatgaacagtccaggctcgacgccaagaacaacggcttcgtccgcttc
atcaacatggtcaccgtccgctccaagggtggcgatctggttgccatgaaccggtcgggt
tcgatcgccgtcgtcgatgatcgtggccgcgaaaaggaacgctaccaggttgtctacgga
gccaagctcaaggtcgaggacggcgccgccgtcaagctcggccaggccatggccgagtgg
gacccgtacaccttcgcgatcctcaccgaaatcggcgggaccatccagttcaaggacctg
caggaaggcatcacccttaacgaagaagtcgatgaagtcactggcctctcccgtctcgtc
gtctccgacgccgccgacgaaaagcgccagccggccatcgtcatcaagggtgccaaaggc
aacaagcgttacctcatgccgtcccgttcgcacctcatgatccaggatggcgacgaggtc
ttccctggcgatatccttgccaagatcccgcgcgaaaccacgcgcaccaaggacatcacc
ggcggtctgccccgcgtcgtcgaactcttcgaggcccgcaagccccgcgaaaccgcgatc
atcagcgagatcgatggcacggtcaagttcggcgaagtctcgaagggtcagcgcaagatc
tacgtcaccgccgacaacggagaagagaaggaatactccgtgccgcgcggcgtccacatc
aacgtgcaggaaggtgagcgcatgcgcgccggcgaacctcttatggatggtccgctgaac
ccgcatgacatcctcgccgtgctcggtgaaaaggagctgcaaggctacctggtcaatgaa
atccaggaagtctaccggctccagggcgtcactatctccgacaagcacatcgagacaatc
gttcgccagatgcttcgctgggtgaagatcgaagaggtcggcgacaccagcttcctgctc
gagcagcaggtcgacaagttccgcttccgcgaggaaaacgatcgtgtcatcgctgaggga
ggccgtccttgcgtcggtcgtccgctcctgctcggcatcaccaaggcctcgctctcgacc
gacagcttcatctcggccgctagcttccaggagaccacgagggtactcaccgaagcctcc
atcaacggagccatcgataacctccgcggcctcaaggaaaacgtcatcgtcggtcgtctc
atccctgccggaaccggcatggaatactaccgcaacatccaactctcgcccgaactcgaa
gaggcagcggccaaggtgcagcaagaagtcaccgccgccttcgaagaagccgagcgcgaa
ctcgaattaatgcgccaagaaggcgaagccgaagaaatggccgccgagtag
DBGET
integrated database retrieval system
