Acidisarcina polymorpha: ACPOL_5178
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Entry
ACPOL_5178 CDS
T05576
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
abas
Acidisarcina polymorpha
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abas03016
]
ACPOL_5178
Enzymes [BR:
abas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ACPOL_5178
Transfer RNA biogenesis [BR:
abas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACPOL_5178
Prokaryotic type
ACPOL_5178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AXC14432
UniProt:
A0A2Z5G5F8
LinkDB
All DBs
Position
complement(5526027..5526803)
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AA seq
258 aa
AA seq
DB search
MDEKGENWKLTLAYDGTDFHGWQVQPNQPTIQGELSDAIYRIVGERVLPQGSGRTDAGVH
ALAQVASCLLAAPIPPANLQRALNRSLPASIRVLAAEIAPIGFHARHSATSKTYEYRIFR
DDLCSPFLARYAYALNWPLDLEAMTLAAAQVIGEHDFSSFAANDPDRNVRDENPNSQPSF
VRTIHNSSWDMEGNLLIYRVTGSGFLHHMVRNLVGTFLDVGRGNLAAAAIAEILAAKTRS
AAGSTAPARGLFLVDVRY
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaaaagggcgaaaactggaagcttaccctggcctatgacggcaccgactttcat
ggatggcaggttcaaccgaatcaaccgacgatccaaggcgaattgtccgatgcgatttac
cgaatcgtgggagaacgagttctgcctcaaggctcgggtagaaccgacgctggcgttcat
gcgcttgcccaggtagcttcttgcctcctggcggcccctattccaccggccaatttgcag
cgtgcgttgaaccgcagcctgccggcttcgattcgcgtcctcgctgcagagatagcgccg
atcggcttccacgcgcgccatagcgcaacgagcaaaacctacgaataccggatcttccga
gatgacctctgttcgcctttcctcgctcgctatgcctacgctttgaattggcctctggac
ctggaagcgatgaccctggctgctgcgcaagtaataggagagcatgactttagctccttt
gcagccaacgatcccgatcggaacgtgagagacgagaaccccaattctcaacctagtttc
gtgcgaaccattcataattcctcctgggacatggagggaaaccttctaatctaccgggtc
acgggaagcggatttctccaccacatggtgcgcaacctggtcggcacgttcctggatgtt
ggccgtgggaacctggccgccgcggcgatcgcggagatcctggcggccaagaccaggagc
gccgctggatcgacagcacccgcgcgaggtctttttctcgtcgatgtccgctattaa
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