Acidisarcina polymorpha: ACPOL_5301
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Entry
ACPOL_5301 CDS
T05576
Name
(GenBank) hypothetical protein
KO
K03701
excinuclease ABC subunit A
Organism
abas
Acidisarcina polymorpha
Pathway
abas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPOL_5301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_5301
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPOL_5301
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACPOL_5301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
DUF4350
AAA_25
RsgA_GTPase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXC14551
UniProt:
A0A2Z5G631
LinkDB
All DBs
Position
5641104..5643653
Genome browser
AA seq
849 aa
AA seq
DB search
MTGDDLARRRGAAAVDGMVRVRGAREHNLKNLDVDIPRDALVVFTGVSGSGKSSLAFGTL
YAEAQRRYLESVSPYARRLFHQLAVPEVDSIDGLPPAVALQQQRGSPTTRSSVGSVTTLS
NLLRMLYSRAGDYPSGQAMLYAESFSTNTAEGACPKCHGLGRIYEVTEKSMVPDDSLTIR
QRAVAAWPTAWQGQNLRDILVTLGYDVDKPWRELSKKDRDWILFTDEQPTVPVYAGFTPT
ETRAALRRKLEPSYQGTFTGARRYVLSTFANSQSAMMKRRVAQFMLSTECPVCHGKRLRP
ESLRVKFAGMDIAEISALPMKRLESIFRSCAEDRGTGQANPDGQHPEKAIVAQRISQDIL
ARLEVLLDLGLGYLSLERSTPTLSPGELQRLRLATQVHSNLFGVVYVLDEPSAGLHPADT
DALLKALHRLKESGNTLFVVEHELEVMRSADWLVDVGPGAGENGGQILYSGPPDGLRTVT
ASQTRRYIFAQGHSTGRTPREPRGWLRLRGVSLNNLERLDVAIPLGVFTSVTGVSGSGKS
SLISQALVDLVADRLGQRIEPDGDIDNEELEQAAPITAAGEIVSGVESLRRMVRVDQRPI
GRTPRSNMATYTGLFDHVRRLFAATKLARSRHYDAGQFSFNVGKGRCPTCSGEGSVCVEL
LFLPSVYAPCPTCHGARFNPKTLEIKYHDKDISQVLALTVEAALDFFSGEPTVQRSLRVL
SDVGLGYLKLGQPATELSGGEAQRIKLATELQRAQHGDTLYILDEPTTGLHPSDVERLQA
QLDGLVEAGNTVVVVEHDMQIVAESDWMIDIGPGAGDEGGTIVASGPPSEVMKSERSKTA
HYLRKYFHP
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggatgatttagcacgccgcaggggcgcagccgcagttgatgggatggtgcgg
gtcaggggcgcgcgagagcataacctcaaaaacctcgacgtcgatattccccgcgacgcc
ctggtagtgttcacgggggtttcgggatccgggaagtcgtcgctcgcgttcggcacgctc
tacgctgaggctcagaggcgatatctcgagtcggtgtcgccctatgcgcggcgtctcttc
caccaattggcggtgccggaggttgactcgatcgacgggctgcctcccgcggtcgctctg
cagcagcagcgagggtccccgacgacccggtcgtccgtcggtagcgtgaccacgctctcc
aacctcttgcgcatgttgtattctcgcgccggagattatccttctggtcaggcgatgctc
tatgccgaatcattctctaccaacacggctgaaggagcttgccccaagtgtcatgggctg
gggcgcatctacgaggtaacggaaaagtcgatggttccggatgactcgctgaccatccgc
caacgcgcagttgcggcgtggccgaccgcatggcagggccagaacctcagagacatcctg
gtgacactcggctacgacgtcgacaagccgtggcgcgagctttcgaaaaaggaccgcgat
tggattttgtttactgacgaacagccgaccgttccggtgtatgccggatttacgcccacg
gagactcgggcagccctgcgccgcaaactggagcccagctatcagggaacgttcacggga
gcgcgacgctatgtactcagcaccttcgcaaacagccagagcgctatgatgaagcgtcgc
gtcgcgcagttcatgctgagtacggaatgcccggtgtgccatggcaagcggctgcggccg
gagtcccttcgagtgaagtttgcgggaatggacatcgccgagatttccgccctccccatg
aagcggctggaatccatatttcgctcgtgtgcggaagatcggggcacgggccaagcgaac
ccagacgggcagcatccagagaaagcgatcgttgcgcagcgaatctcccaggacattttg
gcgaggcttgaggtgctgctcgatcttggtctcggatatttatcgctggagcgaagcacg
ccaaccctttcgccgggtgaattgcagcgtctgcgtttggcaacgcaggtacactccaat
cttttcggcgtagtctatgtgctcgacgagccgtcagccggtctgcaccctgcggatacg
gatgccttgttgaaggcgctccatcggctgaaggagtcgggcaatacgctgtttgtggtt
gagcatgaactcgaagtgatgcgaagcgccgactggctcgtggacgtggggccgggagcc
ggagagaacggcggacagattttgtacagtggtccgccggatggtctgcgcactgtgacc
gcctcccagactcgccggtacatcttcgcgcaagggcattcgactggccgaacaccccgg
gagccgcgcggctggcttcgcctccgtggcgtcagcctcaataacctcgaacgtctggat
gtggcaattccgctgggtgtgtttacttcggtgaccggtgtttcgggatcggggaagtcg
agcctgatcagccaggcgcttgtggacctggtggctgatcgcctgggccagaggattgaa
cctgacggggatatcgataacgaggaactcgaacaagctgcgccgataactgccgcaggt
gaaatcgtgagcggtgtagagagcctgcggcgcatggttcgcgttgaccagaggcccatt
ggacgcacgccgcgctcgaacatggccacctatacggggctgttcgatcatgtgcggagg
ctcttcgcggccacaaagctggcgcgatcgagacactatgatgcgggtcaattttcattc
aatgtggggaaaggccgctgccccacctgctcgggtgagggatcggtatgtgtagagctt
ctttttctgcccagcgtgtatgctccttgtcccacgtgccatggagcgcgtttcaatccc
aaaacactcgagatcaagtatcacgataaggacatctcccaggtgttggcgctcacggtc
gaagcggctctcgactttttctccggtgagccgactgttcagcgctccctgagagtcctg
agcgatgtcgggctgggatatctgaagctgggccagccggccacggagttatccggaggc
gaggcgcagcgcatcaagctggccactgagcttcagcgtgctcagcatggagacaccctt
tacattctcgatgaaccgactaccggccttcatccgtcagacgtggaacgcctgcaggcg
cagttggacggactcgttgaagcgggaaacacggttgtggtggttgagcacgatatgcag
atcgttgccgagagcgattggatgatcgacattgggccgggagcgggcgacgagggcggc
acgatcgtcgcaagtgggccgccgagtgaagtgatgaagtccgagcgcagtaaaacggcg
cactaccttagaaaatactttcatccctaa
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