KEGG   Acidisarcina polymorpha: ACPOL_5301
Entry
ACPOL_5301        CDS       T05576                                 
Name
(GenBank) hypothetical protein
  KO
K03701  excinuclease ABC subunit A
Organism
abas  Acidisarcina polymorpha
Pathway
abas03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:abas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACPOL_5301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abas03400]
    ACPOL_5301
DNA repair and recombination proteins [BR:abas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACPOL_5301
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACPOL_5301
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_16 AAA_29 DnaJ_CXXCXGXG DUF4350 AAA_25 RsgA_GTPase Viral_helicase1
Other DBs
NCBI-ProteinID: AXC14551
UniProt: A0A2Z5G631
LinkDB
Position
5641104..5643653
AA seq 849 aa
MTGDDLARRRGAAAVDGMVRVRGAREHNLKNLDVDIPRDALVVFTGVSGSGKSSLAFGTL
YAEAQRRYLESVSPYARRLFHQLAVPEVDSIDGLPPAVALQQQRGSPTTRSSVGSVTTLS
NLLRMLYSRAGDYPSGQAMLYAESFSTNTAEGACPKCHGLGRIYEVTEKSMVPDDSLTIR
QRAVAAWPTAWQGQNLRDILVTLGYDVDKPWRELSKKDRDWILFTDEQPTVPVYAGFTPT
ETRAALRRKLEPSYQGTFTGARRYVLSTFANSQSAMMKRRVAQFMLSTECPVCHGKRLRP
ESLRVKFAGMDIAEISALPMKRLESIFRSCAEDRGTGQANPDGQHPEKAIVAQRISQDIL
ARLEVLLDLGLGYLSLERSTPTLSPGELQRLRLATQVHSNLFGVVYVLDEPSAGLHPADT
DALLKALHRLKESGNTLFVVEHELEVMRSADWLVDVGPGAGENGGQILYSGPPDGLRTVT
ASQTRRYIFAQGHSTGRTPREPRGWLRLRGVSLNNLERLDVAIPLGVFTSVTGVSGSGKS
SLISQALVDLVADRLGQRIEPDGDIDNEELEQAAPITAAGEIVSGVESLRRMVRVDQRPI
GRTPRSNMATYTGLFDHVRRLFAATKLARSRHYDAGQFSFNVGKGRCPTCSGEGSVCVEL
LFLPSVYAPCPTCHGARFNPKTLEIKYHDKDISQVLALTVEAALDFFSGEPTVQRSLRVL
SDVGLGYLKLGQPATELSGGEAQRIKLATELQRAQHGDTLYILDEPTTGLHPSDVERLQA
QLDGLVEAGNTVVVVEHDMQIVAESDWMIDIGPGAGDEGGTIVASGPPSEVMKSERSKTA
HYLRKYFHP
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgacaggggatgatttagcacgccgcaggggcgcagccgcagttgatgggatggtgcgg
gtcaggggcgcgcgagagcataacctcaaaaacctcgacgtcgatattccccgcgacgcc
ctggtagtgttcacgggggtttcgggatccgggaagtcgtcgctcgcgttcggcacgctc
tacgctgaggctcagaggcgatatctcgagtcggtgtcgccctatgcgcggcgtctcttc
caccaattggcggtgccggaggttgactcgatcgacgggctgcctcccgcggtcgctctg
cagcagcagcgagggtccccgacgacccggtcgtccgtcggtagcgtgaccacgctctcc
aacctcttgcgcatgttgtattctcgcgccggagattatccttctggtcaggcgatgctc
tatgccgaatcattctctaccaacacggctgaaggagcttgccccaagtgtcatgggctg
gggcgcatctacgaggtaacggaaaagtcgatggttccggatgactcgctgaccatccgc
caacgcgcagttgcggcgtggccgaccgcatggcagggccagaacctcagagacatcctg
gtgacactcggctacgacgtcgacaagccgtggcgcgagctttcgaaaaaggaccgcgat
tggattttgtttactgacgaacagccgaccgttccggtgtatgccggatttacgcccacg
gagactcgggcagccctgcgccgcaaactggagcccagctatcagggaacgttcacggga
gcgcgacgctatgtactcagcaccttcgcaaacagccagagcgctatgatgaagcgtcgc
gtcgcgcagttcatgctgagtacggaatgcccggtgtgccatggcaagcggctgcggccg
gagtcccttcgagtgaagtttgcgggaatggacatcgccgagatttccgccctccccatg
aagcggctggaatccatatttcgctcgtgtgcggaagatcggggcacgggccaagcgaac
ccagacgggcagcatccagagaaagcgatcgttgcgcagcgaatctcccaggacattttg
gcgaggcttgaggtgctgctcgatcttggtctcggatatttatcgctggagcgaagcacg
ccaaccctttcgccgggtgaattgcagcgtctgcgtttggcaacgcaggtacactccaat
cttttcggcgtagtctatgtgctcgacgagccgtcagccggtctgcaccctgcggatacg
gatgccttgttgaaggcgctccatcggctgaaggagtcgggcaatacgctgtttgtggtt
gagcatgaactcgaagtgatgcgaagcgccgactggctcgtggacgtggggccgggagcc
ggagagaacggcggacagattttgtacagtggtccgccggatggtctgcgcactgtgacc
gcctcccagactcgccggtacatcttcgcgcaagggcattcgactggccgaacaccccgg
gagccgcgcggctggcttcgcctccgtggcgtcagcctcaataacctcgaacgtctggat
gtggcaattccgctgggtgtgtttacttcggtgaccggtgtttcgggatcggggaagtcg
agcctgatcagccaggcgcttgtggacctggtggctgatcgcctgggccagaggattgaa
cctgacggggatatcgataacgaggaactcgaacaagctgcgccgataactgccgcaggt
gaaatcgtgagcggtgtagagagcctgcggcgcatggttcgcgttgaccagaggcccatt
ggacgcacgccgcgctcgaacatggccacctatacggggctgttcgatcatgtgcggagg
ctcttcgcggccacaaagctggcgcgatcgagacactatgatgcgggtcaattttcattc
aatgtggggaaaggccgctgccccacctgctcgggtgagggatcggtatgtgtagagctt
ctttttctgcccagcgtgtatgctccttgtcccacgtgccatggagcgcgtttcaatccc
aaaacactcgagatcaagtatcacgataaggacatctcccaggtgttggcgctcacggtc
gaagcggctctcgactttttctccggtgagccgactgttcagcgctccctgagagtcctg
agcgatgtcgggctgggatatctgaagctgggccagccggccacggagttatccggaggc
gaggcgcagcgcatcaagctggccactgagcttcagcgtgctcagcatggagacaccctt
tacattctcgatgaaccgactaccggccttcatccgtcagacgtggaacgcctgcaggcg
cagttggacggactcgttgaagcgggaaacacggttgtggtggttgagcacgatatgcag
atcgttgccgagagcgattggatgatcgacattgggccgggagcgggcgacgagggcggc
acgatcgtcgcaagtgggccgccgagtgaagtgatgaagtccgagcgcagtaaaacggcg
cactaccttagaaaatactttcatccctaa

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