Acidisarcina polymorpha: ACPOL_5336
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Entry
ACPOL_5336 CDS
T05576
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abas
Acidisarcina polymorpha
Pathway
abas03030
DNA replication
abas03430
Mismatch repair
abas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPOL_5336
03430 Mismatch repair
ACPOL_5336
03440 Homologous recombination
ACPOL_5336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abas03032
]
ACPOL_5336
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_5336
Enzymes [BR:
abas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPOL_5336
DNA replication proteins [BR:
abas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACPOL_5336
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACPOL_5336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AXC14586
UniProt:
A0A2Z5G7N9
LinkDB
All DBs
Position
5681390..5684914
Genome browser
AA seq
1174 aa
AA seq
DB search
MAEFTHLHLHTDYSLLDGACDVEKLVNHVADIGQQAVAITDHGNIYGAVHFFEAAKKRGV
KPILGCELYICQKEDHRADPQGDDYNHLLVLAENEEGYRNLVRITSEASLHGFYRKPRIS
KKYLAEHASGLVGFSGCLAGELCQELIAGKYEEARHTASEYQDIFGKGNFFLEIQDQGLE
LEKKIHADLFKLESELNIPLVATNDSHYLCEDDHHAHEVLLCVQTAGSIHDPKRFKFDSD
QFFVKSAAQMEKLFSHAPQVVNRTMQFAERCSLKINKVDNPFPEFAVPAGHTIDSYFEEV
CRQGFRKRLDTAVRHLQDRGLLRFPISDYEARLEREIDCIKAMKFAGYFLIVWDFIKYAR
DHDIPVGPGRGSAAGSLVSYVMEITNIDPLQNILLFERFLNPERVSMPDIDIDFDMNRRG
EVIEYVTRKYGREQVAQIITFNTMAAKAAIKDVGRALDLPYGDVDRIAKMVPATIGVTIE
QALKDSPSLQEAYDKDPQTRELIDTARKLEGLVRGAGVHAAGVVIAPRPLTDLVPVTRSK
NDEIVTSYDMKAIEKLGLLKMDFLGLTTLTVIDDCLKLIKSNQEVELDLETIPLDDQHTY
EQVFHRALTSGIFQFESGGMRDVLRRYKPTSVEDLTALNALYRPGPIQGGMIDDFIERKW
GRRKVEYLLPDLEVLLKETLGVIVYQEQVMQIANVLAGYSLGDADLLRRAMGKKNAEEMA
KQRERFVSGAAAKKYPKDTITRIFDLMEQFAGYGFNKSHSAAYALLAYQTAYLKTYYPIE
FMSALLTSEISKPENVVKYIKECREMGISVEPPDVLFSGANFTPHGKAIRFGLTAIKNVG
RNAIDSILAARAALEAEEKSFASYWEFCEKVDLRLMNKRVLESLIKAGALDSFGRRSQLI
AAADKAMEQAQKAQRDSAAGQHGLFGLFDDGPVTSRAANDLPKVPDWDENQRLQSEKEVL
GFFVSGHPLDKYAEKLRNLPGVVDTATALEMKPAPVTFRRGQPASTENDIAIAGVIVGLK
VAKSKRSGELYAQASLEDTVGKIDLICFPKDYERLAANLKIEVPVLVRGQIRAEEEAAPK
LCVSSIQALEDVKLRLPQNVKIRVALDRASAATLAELKAMIGESPGPGRVMFSMEQAGEY
VVVMEPSGVTVGADRAFFDRAEILLGRGMVVAVD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttacccaccttcatcttcatacggactattcactcctggatggcgcctgc
gacgtcgagaaactggtcaaccatgtcgccgatatcgggcagcaggcggttgccatcacc
gaccacggcaacatctacggagcggtgcatttctttgaggcggcgaagaagcgcggcgtt
aagccgattcttggctgcgagctctacatctgccagaaggaagaccatcgcgccgaccct
caaggcgatgattacaaccacctcctagtgctggccgagaatgaggagggctatcgcaac
ctggttcgaatcacctcggaggcgtcgctgcatggtttctaccggaagccgcgcattagc
aagaagtaccttgcggaacatgcgagcggtctggtgggcttttcgggctgcctggcgggt
gagctctgccaggaattgatcgccggcaaatacgaagaagcgcggcatacggcgagtgaa
taccaggacatcttcggcaaagggaacttttttctagagatccaggaccagggtctggaa
ctcgaaaagaaaatacacgccgatcttttcaagctggagagcgaactcaatattccgcta
gtcgcgaccaatgacagccattatctctgtgaagacgatcatcacgcccatgaagtgctg
ctgtgcgtacaaaccgcgggctcgatccatgaccccaagcggttcaagttcgactccgac
cagttctttgtgaagtcggcggcgcagatggagaagctcttctcccatgcgccgcaggtg
gtcaatcggacgatgcaattcgctgagcggtgttcgctcaagatcaataaggtggataat
ccatttccagagtttgcggttcccgccggacatacgatcgacagctattttgaggaggtg
tgccggcagggtttccgcaagcggctggatacggcggttcgccatctgcaggaccgcgga
ttgttgcgctttccgatctccgattacgaggcgcgtttagagcgggagatcgattgcatt
aaggcgatgaagttcgccggatatttcctgattgtctgggacttcatcaagtacgcgcgc
gaccacgatattccggtgggtccggggcgtggttcggcggcaggttcgctggtctcgtat
gtgatggaaatcacgaatatcgatccactgcagaacattctgctcttcgagcggtttctg
aatccggagcgggtatcgatgccggatatcgatatcgatttcgacatgaaccggcgcggc
gaagtgatcgaatatgtgacccgcaaatacggccgcgagcaggtagcgcagatcatcacc
ttcaacaccatggcggcgaaggcggcgatcaaggacgtcggacgagcgctcgaccttcct
tatggggatgtcgaccggatcgcgaagatggttccggcgaccatcggggtgacgatcgag
caggcgttgaaggattctccctctctgcaggaggcctatgacaaggacccacagacccgc
gagctgatcgacacggcgaggaagctcgaggggctggtgcgcggagcaggcgtgcatgcg
gcaggagtggtcatcgcgccgcggccgctcaccgatctcgtcccggtgacccggagcaag
aacgacgaaatcgtgacttcctacgatatgaaggccatcgagaagctgggccttctcaag
atggacttcctcggactgacgaccctgaccgtcatcgacgactgcctcaagctgatcaag
agtaatcaggaagtggagctggatctggagacgatcccgctcgatgaccagcatacgtat
gagcaggtctttcaccgggcgttgacttcggggatctttcagtttgagtccggcggcatg
cgcgacgttctgcggcggtacaaaccgacttcggtcgaagacctgaccgccttgaatgcg
ctctatcgtccgggtccgatccagggcggcatgatcgatgactttatcgagcgcaagtgg
gggcggcggaaggtggaatatctgctgcccgacctggaagtgctgttgaaggagacgctg
ggcgtcatcgtctaccaggaacaggtgatgcagatcgccaatgtgcttgccggttattcg
ttaggagacgccgatcttctccgccgggcgatgggcaaaaagaacgccgaggagatggcg
aagcagcgcgaacggtttgtctcgggcgcggcggccaagaaatatccgaaggacacgatc
acccgcatcttcgacttgatggagcagtttgccggatacggcttcaacaagtcgcactct
gccgcgtatgcgctgctggcctaccagactgcctacttgaagacctactatccgattgag
ttcatgtcggcgttgctgacgtcggaaatttcgaagccggaaaacgtcgtcaagtacatc
aaggaatgccgcgagatggggatttcggtcgagcctccggatgtgctgtttagcggcgcg
aattttacccctcatggcaaggcaattcgttttggattgacggcgatcaaaaatgtcggc
cgaaatgcgatcgactcgatccttgctgcgcgtgcggccttggaggcggaagagaagagc
tttgcttcgtactgggagttttgcgagaaggttgatctgcggctcatgaacaagcgtgtt
ctggagtcgttgatcaaggccggggcgctcgattcgtttgggaggcgttcgcagttgatc
gccgcggccgataaggcaatggaacaagcgcagaaggcgcagcgggattcggctgctgga
cagcatggactgtttggactgtttgacgatgggccggtgacttcccgggcggcgaacgat
ctgcccaaggttccggactgggacgaaaaccagcggttgcagagcgaaaaggaagtgttg
gggttctttgtttcggggcacccgctggacaagtacgcggaaaagctgcgcaacctgcct
ggggtggtcgatacggcgacggcgcttgagatgaagccggctccggtgacctttcggcgc
ggtcagccggcctcgacagagaatgacatcgctatcgccggagtgatcgtcggcttgaag
gtagccaagtcgaagcggtctggcgaactctacgcgcaggcatctttagaggacacggta
ggcaagatcgatctgatctgcttccccaaggactatgagaggctggcggcaaatctcaag
atcgaggtgccggtgctggtgcggggtcaaatacgcgccgaagaggaagctgcgccgaag
ctctgcgtctcttcgattcaggcgctcgaagatgtgaagctgcgcctaccgcagaatgtg
aagattcgggtcgcgctggatcgggcgagtgctgcgacccttgccgaactgaaggcaatg
atcggcgagtcgccagggcccggacgggtgatgttcagcatggaacaggcaggcgaatac
gtcgtcgtcatggagccgtccggagtgaccgtaggagcggaccgcgctttctttgatcgt
gccgagatcctgttggggcgagggatggtggttgcggtcgattga
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