Acidisarcina polymorpha: ACPOL_5896
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Entry
ACPOL_5896 CDS
T05576
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
abas
Acidisarcina polymorpha
Pathway
abas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACPOL_5896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_5896
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACPOL_5896
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACPOL_5896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF1270
DUF4776
Motif
Other DBs
NCBI-ProteinID:
AXC15140
UniProt:
A0A2Z5G841
LinkDB
All DBs
Position
complement(6292609..6293352)
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AA seq
247 aa
AA seq
DB search
MIAHQVEAIVLRTWPIHEADQIVSLFTRDYGKIKGVAKSAARSRRRFGGALEPMTHVRAS
YAEKPRQELVRLDSFDIVTSPLSQAVDYGRASALAFYAEVLEETLPDHDPQDAVFRLLVA
VLAHTRIESIWMPITYFTIWTTRLMGWLPDLTACVHCGTPFAGSSAWYHQQNDGLFCQAH
RPPGSSMLSVESQSLAHRILRSPVPVLAAEPWPRTRAADLRRFGMQALERHIDRRLKSAT
ALHRLSQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgcatcaggttgaggccattgtgctccgcacctggcccatccacgaggccgac
cagatcgtctcgctcttcactcgcgattacggcaagatcaagggagtagccaagtccgca
gcccgctctcgcagacgattcggcggcgctcttgaaccgatgactcacgtccgcgccagc
tatgcggaaaagcctaggcaggaactggttcggctcgactcgttcgacatcgtgacctcg
ccactttctcaggcggtcgactatggccgcgccagcgctctcgccttctacgccgaagtc
ctcgaagaaacgctccccgatcacgaccctcaggacgcggtctttcggctgctggtggcc
gtacttgcccatacgcgaattgaatccatctggatgcccatcacttacttcacgatctgg
acgacgcggctcatgggctggcttcccgatttaaccgcgtgtgtgcattgcggaacgccc
tttgcgggaagctctgcctggtaccaccagcaaaacgatggactcttttgccaggcacac
cggccacccggctcctcgatgctttccgtcgagtcgcagtcgctggctcaccggatcctc
cgttcgcccgtgccggtacttgccgccgagccctggcctcgtacccgcgccgccgacctg
cgccggtttggcatgcaagccctggagcgtcatatcgatcgacggctgaagagtgcaacg
gctctgcatcggctgagccaatga
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