Acidisarcina polymorpha: ACPOL_5918
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Entry
ACPOL_5918 CDS
T05576
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
abas
Acidisarcina polymorpha
Pathway
abas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPOL_5918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abas03400
]
ACPOL_5918
DNA repair and recombination proteins [BR:
abas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPOL_5918
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACPOL_5918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_16
Kinesin
AAA_5
AAA_22
Microtub_bd
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AXC15162
UniProt:
A0A2Z5G7D3
LinkDB
All DBs
Position
complement(6321829..6323946)
Genome browser
AA seq
705 aa
AA seq
DB search
MSSKEVTATGNQRNRPMIQAPGVSAGRRQTAPPPLHLPSKQANMDFQLVSDYKPRGDQPR
AIDELISGIAAGEQHQTLLGVTGSGKTFTMAKIIEALNRPALILAHNKTLAAQLFHEFKQ
FFPSNAVEYFVSYYDYYQPEAYIPAGDLYIEKEATINEELDKLRLSATRSLFERRDAIIV
SSVSCIYGLGSPEAYYGMLMLLEKGQKIRREDITRRLVEILYERNDSDFRRGTFRVRGDV
IEVFPTYDENAFRIELFGDEIDSLAQIDPLFGTVRQKYARLPIYPKSHYVVQPERKSTAI
GTILEELEWWEKDLENQGRLVESQRIHQRTRFDLEMIKSMGYCHGIENYSRHFSGRLPGE
PPPTLLDYFPRDFLLFIDESHVTVPQLHGMWHGDRSRKQNLVDYGFRLPSAMDNRPLKFE
EFESRTGQIIYVSATPSAYELTKSSGVVVEQIIRPTGLVDPEIEIRPIRGQIDDLLAEIR
IRAKKNERVLVTTLTKRMAEDLAGYYTEVGVRCRYMHSEIETLERIRILRDLRKGEYDVL
IGINLLREGLDLPEVSLVAILDADKEGFLRSSGSLIQTIGRAARNVHGRAILYADKMTDS
MKQAIDETNRRREVQVEYNEEHGITPTSIIRAVDMSLAQILKAEYADLTDQEATMPEFKN
QLELDAYIANLESDMREAAKKFEFEKAAKLRDLVKDLRTKEFLFG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaaagaagtcaccgcaacaggaaatcagcgcaacaggccgatgatacaggct
ccaggagtttcggccggcagaaggcagaccgcgccgccaccgctgcatttaccatcaaag
caggcaaacatggattttcagctagtcagcgactacaaacctagaggcgaccaaccccgc
gccatcgacgaacttatctccggcattgcggcgggcgagcagcatcagacgctgcttggc
gtgaccggttcgggcaagactttcaccatggccaagatcattgaggcgctgaaccggcca
gcgctgatccttgctcacaacaagacgctcgccgcccagctctttcacgagttcaagcag
tttttcccctccaatgcggtcgagtactttgtctcctactacgattattaccagccggag
gcctacattccggctggcgacctgtatatcgagaaggaagcgaccatcaatgaagagctc
gacaagctgcggctctcagcgacgcgctcgctcttcgaacgacgcgacgccatcattgtt
tcgtcggtttcgtgcatctacggcctcggttcgccggaagcctactacggcatgttgatg
ttgcttgaaaaaggccagaagatccgccgcgaagacattacccggcggctggtcgagatc
ctttacgaacgcaatgactccgattttcgccgtggcacttttcgggtacgcggcgatgtc
atcgaggtctttccgacttacgacgaaaatgcctttcgcatcgagctttttggcgacgaa
atcgattcgctcgcgcagatcgatccgctctttggcaccgtccggcagaagtatgcacgg
ctgccgatttatcccaagtcccactatgtcgttcagccagagcgcaagtcgaccgcgatc
ggcaccattctcgaagagctggaatggtgggagaaggacctcgagaaccagggtcgtctg
gtggagtcgcagcggattcatcagcggacgcggttcgacctcgaaatgatcaagtcgatg
ggctactgccacggcattgagaattactcccgccacttctcgggacggctgccgggcgag
cctcccccgacgctgctcgattattttcctcgtgactttctactcttcatcgatgagtcg
catgtgacggttccgcagctgcatggaatgtggcatggggaccgctcgcgcaaacagaac
ctggtcgattacggcttccgcctgccctcggcgatggacaaccgtccgttgaaatttgag
gagtttgaaagccgcaccggtcagattatttatgtctcggcgacgccgagcgcttatgag
ctgacgaagtcttcaggggtggtcgtcgagcagatcattcggccgacggggctggtcgat
ccggagatcgagattcgcccgatccgcggccagattgacgatttgctggccgagatccgc
attcgtgcgaagaaaaatgagcgcgtgctggtgacgacgctcaccaagcggatggcggaa
gacctggctggctactataccgaggtcggggtccgctgccgctacatgcactcggagatt
gagacgctcgagcgcattcgcattctgcgcgacctgcggaagggtgagtacgacgtgctc
atcggcatcaatctgttacgcgaagggcttgacttgccggaggtctcgctggtcgcgatt
ctcgatgcggataaagagggctttctgcgcagttcaggttcgctgatccagaccatcggc
cgcgcggcccgcaatgtgcatggccgggcaattctctatgcggacaagatgaccgattcg
atgaagcaagcgatcgatgaaaccaaccgtcgccgcgaagtacaggtggaatataacgaa
gagcacgggatcacgccaacctcgatcattcgcgccgtggatatgtcgctcgcccagatc
ctcaaagccgaatacgccgatttgaccgaccaggaagcgacgatgcctgagttcaagaac
cagcttgagctcgacgcctatattgccaatctcgaatcggatatgcgcgaggcggcgaag
aagttcgagtttgagaaggccgcgaagctgcgcgatctggtgaaggatttgcggacgaag
gagttcttgttcggctaa
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