Candidatus Brevifilum fermentans: CFX1CAM_0036
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Entry
CFX1CAM_0036 CDS
T04881
Name
(GenBank) putative oligopeptide ABC transporter permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFX1CAM_0036
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abat02000
]
CFX1CAM_0036
Transporters [BR:
abat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFX1CAM_0036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF5065
Motif
Other DBs
NCBI-ProteinID:
SMX53102
UniProt:
A0A1Y6K083
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All DBs
Position
I:41134..42474
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AA seq
446 aa
AA seq
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MKSFIDNIKQFPSAIFGSIMIILLVALAIYVVIAIPYRDAIYEWRGSEEIQGTAPKNARP
TYVNWFRTKKYSETILIDSTNPEDEVEKTVTEVAADMWDIQMVFKFDYPYDGFPQELQVI
LSSIYKEKSPFVTLTWFTPDGEKIKVADITAKHHEVVRFDLQDKLVRKLDGVLPRIGLLR
VPDVEPYKVQKGTYELHVDTIVFEEGSDIEAKFVSFGQVHGLAGTDHRRRDLMLPLLWGA
PIALSFGFLAAIGTTFTTMFIAAIGVWFGGLTDEIIQRITEIYMLLPFLPILIMVGVFYS
RSIWTMLWVVILISLFGAGIKNFRAIFLQIKEAAYIEAARSYGAGNWRIINRYLVPRIIP
ILIPGLVSAIPSYVFLEASLAVLGLGDPILPTWGKVINDAQMQGALYNGYYYWVLQPAVL
LMVTGLSFAMIGFALDRIFNPKLREV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcatcgacaacattaaacaattcccctctgccatttttggctcgattatg
atcatcctcctggttgcattggcgatttatgttgtgattgccatcccctatcgcgatgcc
atttacgaatggcgaggaagcgaagaaatccagggtacggcgccaaagaatgctcgccca
acatatgttaactggttccggacaaaaaaatactcggaaacgatcttaatcgacagcacc
aaccccgaggacgaggttgaaaaaacggtcactgaagttgccgctgacatgtgggacatt
cagatggtgtttaagttcgattatccatatgatggtttcccacaggaactgcaagtgata
ttgtcttcaatttataaagaaaaatctccttttgtcaccttgacctggtttacaccagat
ggcgaaaagatcaaagttgctgatatcacggccaagcatcatgaagtcgtccgttttgat
ctgcaagacaagctggttcgtaagctggacggagttcttccacggattggtttgctgcga
gtacccgatgtagaaccttataaggtgcagaagggcacctacgagctgcacgtagatacg
attgtgtttgaggaaggctcggacatcgaagccaaatttgtcagctttgggcaggtgcac
gggttggctggcaccgaccatcgccgacgcgacctgatgctgcccctgttatggggtgcg
ccgatcgccctttcctttgggtttttagccgcaattggaacaactttcaccaccatgttt
atcgccgcgattggtgtgtggttcggcggtttgactgatgagatcattcagcgcatcact
gagatctatatgcttttgcctttcttgccaatcctgattatggtgggtgtgttctacagt
cgtagtatctggacgatgttgtgggtggtaattttgatcagcctgtttggcgctggcatc
aagaatttccgtgccatcttcctgcaaattaaagaagccgcctatattgaagctgcccgt
tcctatggtgcaggtaactggcgtatcatcaatcgctacctggtgccccgtatcatcccc
atcctgatccctggattggtcagtgcgattccgtcgtatgtcttcttggaagcttcctta
gcggtgctgggtctgggcgacccaatcttacccacttgggggaaggtcatcaacgatgcc
cagatgcaaggcgccctctacaacgggtattattactgggttttacagccagcggtcctg
ttgatggtcactggtttaagttttgcgatgatcggttttgcgctcgaccgcatctttaat
cccaaattgagggaggtataa
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