Candidatus Brevifilum fermentans: CFX1CAM_0037
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Entry
CFX1CAM_0037 CDS
T04881
Symbol
oppD
Name
(GenBank) oligopeptide transporter subunit; ATP-binding component of ABC superfamily
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFX1CAM_0037 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abat02000
]
CFX1CAM_0037 (oppD)
Transporters [BR:
abat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFX1CAM_0037 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
TniB
AAA_16
nSTAND3
AAA_5
AAA
AAA_7
nSTAND1
AAA_23
NACHT
Sigma54_activat
Myosin_head
Mg_chelatase
AAA_29
RNA_helicase
AAA_19
ATPase_2
RsgA_GTPase
ABC_ATPase
PRK
AAA_18
AAA_15
MCM
Motif
Other DBs
NCBI-ProteinID:
SMX53103
UniProt:
A0A1Y6K0C0
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All DBs
Position
I:42480..43439
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AA seq
319 aa
AA seq
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MSADTVLSVRDLRLFFRTTKGVVRAVDGVDFDLGRNRAVVIVGESGCGKTSMARAILRLL
PKNVDTYSGKILLNGLDTMALKEEEYRLKMRWVKMSMVPQAAMNSLNPVLKVGDQVAEPA
MIHNDMSKSVAMEQAKTMFQHVGVPLDFLSRYAFELSGGMRQRVAIAMSLVSLPELIILD
EPTSALDVLTQANIFNVLKRIKKELGMSFILITHDIATSSELADDVAVMYAGQIVETGDA
HRFFAAPLHPYSIKLMNSVPRLRARQEPDFITGQPPSLLNPPTSCRFYERCPSRFEPCVE
DPPTVNIEGRTVKCWLHVK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgatacagtattaagtgtaagagatttgcggctgtttttccgcaccaccaag
ggcgttgttcgcgcggtggatggggttgactttgatttaggtcgcaaccgtgccgtggta
attgtgggcgaatcgggttgtggcaagacttcgatggctcgagcgatcttgcgcttgctg
ccgaagaatgtggatacctattccggaaagattttgttaaacggattagacaccatggca
ctgaaggaagaggaataccgccttaagatgcgctgggtaaagatgtcgatggtgccgcaa
gccgccatgaactcgctcaaccctgttttgaaagtgggcgaccaggtggctgaacccgcg
atgatccacaatgacatgagcaaaagtgtcgccatggagcaggcgaagaccatgttccag
catgtgggcgttccccttgattttcttagccgctatgcctttgagttgagcggcggtatg
cgtcaacgtgtggcgattgccatgtcgttagtttcgctgcccgagttgatcatcttagac
gaaccgacctcggctctggatgtgctcacacaggcaaatatcttcaacgtgcttaagagg
attaaaaaggagctgggcatgagcttcatcctcatcacccatgatattgcgacctccagt
gagctggcagatgatgtggctgtgatgtatgccgggcagatcgtggaaaccggagatgcc
caccgctttttcgctgcgccgctgcatccttattcaatcaaattgatgaacagcgtcccg
cggctcagagcccgtcaggaacctgactttattaccggtcagccgcccagcttgctcaac
ccaccgacaagctgccgtttttatgaacgctgtccttctcgttttgagccttgcgttgaa
gatcccccgaccgttaatatcgaaggtcgcacggttaaatgctggctgcatgtgaaataa
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