Candidatus Brevifilum fermentans: CFX1CAM_0263
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Entry
CFX1CAM_0263 CDS
T04881
Name
(GenBank) conserved protein of unknown function
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat03030
DNA replication
abat03430
Mismatch repair
abat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFX1CAM_0263
03430 Mismatch repair
CFX1CAM_0263
03440 Homologous recombination
CFX1CAM_0263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abat03032
]
CFX1CAM_0263
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_0263
Enzymes [BR:
abat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFX1CAM_0263
DNA replication proteins [BR:
abat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFX1CAM_0263
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFX1CAM_0263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SMX53329
UniProt:
A0A1Y6K414
LinkDB
All DBs
Position
I:complement(295090..295662)
Genome browser
AA seq
190 aa
AA seq
DB search
MYPLANPKVIQRARQILAYEPIFIDTETTGFSPQDVVIEVGVVDLHGATLYETLIKPSIP
IPEDAIAIHGIREEMVAESPEWEEAWDELQPLLAGRYIGAYNADFDLRLLKQVHSRHGLV
WPLDDRQFFCVMKLYAAFYGQISPRGNSYRFHKLEAAGAACGIPLPNSHRAIDDAKLTAA
LFNHIDNYPA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtaccctcttgccaatccaaaagtcatccaacgcgcccggcaaatcctggcttatgaa
cccatcttcatcgataccgaaacgaccggtttttctccccaggatgtcgttatcgaggtg
ggcgtggtggatttacacggtgcaaccctgtatgaaaccctgatcaaaccctccataccg
atccctgaagatgccatcgccatccacgggatcagggaggaaatggttgctgagtcgccc
gaatgggaagaagcctgggacgagttgcaacccttactggcggggcgctatatcggggct
tacaacgccgattttgatctacggttgttaaaacaggtccacagccgtcacgggttggtg
tggcctctggatgacaggcagtttttctgcgtgatgaaactgtatgcagccttttacggt
cagattagcccgcgcggcaacagttatcgctttcacaagctcgaggctgccggtgcagcc
tgcggcatcccattgcccaactcgcatcgcgccatcgacgatgccaaattaaccgccgct
ctgttcaaccacattgacaattacccagcctga
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