Candidatus Brevifilum fermentans: CFX1CAM_0289
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Entry
CFX1CAM_0289 CDS
T04881
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abat03016
]
CFX1CAM_0289 (rnz)
Enzymes [BR:
abat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CFX1CAM_0289 (rnz)
Transfer RNA biogenesis [BR:
abat03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CFX1CAM_0289 (rnz)
Prokaryotic type
CFX1CAM_0289 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
SMX53355
UniProt:
A0A1Y6K0Z0
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All DBs
Position
I:317304..318227
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AA seq
307 aa
AA seq
DB search
MFEILFLGTSASAPSAHRGLSSLLIQHEEFRFLVDCGEGTQRQILTAGVGFKRLNQILLT
HGHLDHILGLGGLVSTFLRWDVIEEIEIFGTRHTLDRVHDLIFGVVLRGYQGKPPVILHE
IKPGTFWEAERFTITAFPVEHRGSHSLGYRFEERIRRPFLVEAAESLEIPPGPWRRDLVN
GQTVTLPDGRVIEPDQVLGEPIKGTSLAVVGDTGNAEKLLPYVQGVDALVIEATYIESEA
DLAEQFDHLTAARAAGLAARAQVGRLFLTHLSRRYRRRDILNEAQEIFPNVHVARDFDSF
QIRREDD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaaattttatttctgggtacctctgcctcggcgccttcagcacaccgcggacta
tcttcattattaattcagcacgaagagttccgcttcctggtggattgcggtgaggggaca
cagcgccagattttaacggctggtgttggctttaaacggctgaatcagattctgttgacc
catggacacctggatcatatcctggggctgggcgggctggtatccacctttttacgctgg
gatgtcattgaggagattgagatcttcggcacacggcacacccttgaccgcgtgcacgat
ctgatttttggcgtggtcttacggggttaccagggcaaacctccggtgattttacacgag
atcaagccgggaaccttctgggaagcagaacggttcacgattacagcctttcccgtggaa
caccgcggctctcactcgctgggttaccgctttgaagagcgcatccggcggcctttcctg
gtcgaagcggccgagagcctggaaatcccccccgggccctggcggcgcgacctagtcaat
gggcagacggtaactctgcccgacggacgcgtgattgaacccgaccaggtgctgggtgag
cctatcaagggcaccagcctggctgtagtgggtgatacgggcaatgctgaaaaattactc
ccctatgttcagggggttgatgccctggtgattgaagcgacttacattgaaagcgaagcc
gacctggctgaacagtttgatcacctgacggctgccagggcggccgggttggcagcccgg
gcacaggttgggcgcctgttcctgacgcacctttccaggcgttatcggagacgcgatatt
ctcaacgaagcccaggaaatcttcccgaatgtccatgtggcgcgtgactttgacagtttt
caaattcgcagggaagatgattaa
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