Candidatus Brevifilum fermentans: CFX1CAM_0386
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Entry
CFX1CAM_0386 CDS
T04881
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat03420
Nucleotide excision repair
abat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFX1CAM_0386 (pcrA)
03430 Mismatch repair
CFX1CAM_0386 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_0386 (pcrA)
Enzymes [BR:
abat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFX1CAM_0386 (pcrA)
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFX1CAM_0386 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CFX1CAM_0386 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Tail_spike_N
Motif
Other DBs
NCBI-ProteinID:
SMX53452
UniProt:
A0A1Y6K186
LinkDB
All DBs
Position
I:complement(437861..440062)
Genome browser
AA seq
733 aa
AA seq
DB search
MSDFLTELNPQQKQAVASPPGPILVLAGPGSGKTRVLTYRVAYLIAALEVPAYQIMAVTF
TNKAAREMGNRIKDLLGERVEGLWLGTFHAICGRILRREAAYLPVDSNFVIFDEDDQLAL
IKRVIKEHRLNEKDFNPRQVLAKISNAKNDLQTPEELPLENYRDEIIQSLYRAYQAHLVT
SNAMDFDDMLLYTASLMRNQPDVRQKYAGRFKHILVDEFQDTNQAQYDLLFHLGAHHRNL
FLVGDEDQSIYRWRGADYKNVERFRRDFPDHIEILLEHNYRSTQTILDSATTVINKNVHR
TKKVLFTERGKGEPVIVYEALDDYDEAAYVVDIIARQFEQKTAKETDFAIMYRTNAQSRL
LEEAFRRANMNYRLVGAQRFYGRREVKDMIAFLRLIYNPKDEVSLSRVINLPPRGIGAVT
LQRLQEIAREYGVSSGEVLLSLSLQPDSEFAQALGSLAARLLPFSKLLVGWRSSLDQASL
TGLFDQILLDTDYEAYIKAEDDVFLDRWANVLELRSVLLEYEEAGLDVFLETMALVADQD
TLPETIDAPTLLTLHSAKGLEFPQVFIIGLDEHILPHSRSLNEDEELAEERRLMYVGMTR
AKDRLYLTRAQRRRTPYGNYETMLPSRFLMDLPANLTRGRVSRVDRWDESDDYQQYQWDR
PYGSRAQTAAPKPPKKHEQRFYAEMHVRHPVYGEGIVRSSRLEFGDETVEVYFDGLGLKA
LVASMSRLEIIEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcctcacagagctcaacccacaacaaaaacaggctgtggcttccccgccc
ggtccaattcttgtgttggcaggtcccggatccggaaagactcgcgtgctgacctaccgc
gtggcttatctgatcgcggcattagaggtgcctgcctaccagatcatggcggtcactttt
acgaataaggctgccagggaaatgggcaatcgcatcaaggatttactgggagagagggtc
gaggggctttggctgggcacctttcatgccatatgcggacgcatcctacggcgtgaggcc
gcgtaccttcccgtcgattccaatttcgtaatctttgatgaagatgatcaactggcatta
atcaagcgcgtcatcaaagaacacaggctcaatgaaaaggactttaatccccgccaggtg
ttggctaaaatcagcaacgcgaaaaacgacctccagacaccggaagagctcccgttagaa
aattatcgagatgagatcatccagtcattatacagagcctaccaggctcaccttgtaacc
agcaacgccatggactttgatgatatgctgctgtataccgcgagcttaatgaggaatcaa
cccgatgtgcgtcaaaaatatgccgggcgatttaaacacatcctggtcgatgaattccag
gacaccaaccaggcacaatatgaccttctgttccatttaggcgcgcatcatcgcaacctg
tttctggttggcgacgaagatcaatccatctaccgctggcgcggcgcggattataaaaac
gtggaacgtttcagaagagattttcccgaccatatcgaaatattactggaacacaattac
cgttcaacccaaaccatcctggattctgcgacaacggtgatcaataaaaatgttcaccgg
acaaaaaaggttctctttacggagcgcggtaaaggtgaaccggtgattgtctacgaagcg
ctcgatgattatgatgaggctgcctacgtggtggatatcatcgctcgccagtttgaacag
aaaacagccaaagaaaccgattttgccatcatgtaccgcaccaatgcccaatctcgactg
ctggaagaagccttccgccgcgccaatatgaactatcgcctggtgggtgcacagcgtttt
tacggtcgccgtgaagttaaagacatgattgcctttctgcgcttgatctacaatcccaag
gacgaggtcagcctaagccgggtgatcaacctcccgccgcgcggcattggcgcggtcacc
ctgcaacgtctgcaagaaattgcccgtgaatacggcgtcagcagcggtgaggttctcctg
tccttatctctgcagcctgattcggaatttgcacaggcattgggatcgctcgcagcccgg
ttgttgcccttcagcaagctgctggtcggctggcgcagcagcctggaccaggcatcactc
acaggactgtttgaccagatactgctggatacggattatgaggcttacatcaaagctgag
gatgatgtatttctggaccgttgggcgaatgttctggagctgcggtccgtgctgttggaa
tatgaagaagccggtctggacgtatttttagaaacgatggctctggtcgctgatcaggac
accctcccggaaaccattgacgctcccaccttgctgactctgcactccgccaagggattg
gagtttccgcaagtttttatcatcgggctggatgaacacatcctgccccacagtcgatca
ttaaatgaggatgaggaattggctgaagaacggcgcttaatgtatgtggggatgacccgc
gccaaagatcgcttatacctcacccgcgcccaaagacggcgcaccccttatggcaattac
gaaaccatgctgccttcccggtttttgatggacttgccggcaaacctcacccgggggcgt
gtcagccgggttgatcgctgggatgaaagcgatgattaccaacaatatcaatgggatcga
ccctacggttcaagagcacagacagccgcacccaaacctcctaaaaagcacgaacagcgc
ttttacgcggaaatgcacgtgcgacacccggtgtatggagaaggtatcgttcgtagcagc
cgcctggaatttggcgatgaaaccgtggaggtctattttgacgggctgggcttgaaagca
ctggttgcctccatgtcccggttggagatcattgaagaataa
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