Brevefilum fermentans: CFX1CAM_0449
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Entry
CFX1CAM_0449 CDS
T04881
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abat
Brevefilum fermentans
Pathway
abat03410
Base excision repair
abat03430
Mismatch repair
abat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFX1CAM_0449 (recJ)
03430 Mismatch repair
CFX1CAM_0449 (recJ)
03440 Homologous recombination
CFX1CAM_0449 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_0449 (recJ)
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CFX1CAM_0449 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFX1CAM_0449 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFX1CAM_0449 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
SMX53515
UniProt:
A0A1Y6K1F0
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All DBs
Position
I:complement(505220..506992)
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AA seq
590 aa
AA seq
DB search
MTENNAQPILNQRWRVQPKIPHDIDLALRDFPPLLRQLLYNRGYFNAESASSFVKGEAPF
SSDPLQIKDMRAAVDRLHRAVTSGEKIAIYGDYDADGVTACALIHDFLVILDVKPEIYIP
NRYDEGYGLNMDAIQSLADMGINLVVTVDCGIRSNREVAQAHNLGMDVIITDHHQPGTEL
PPALAVINPKQPEDHYPEKDLSGVGLAYKLTQAYLEVHPQPDVDPEAWLDLVAIGTVADL
VPLKGENRALVKKGLARIRQQRRPGLRALAGTAEVDLTQCDTSMIGFKLAPRLNAAGRME
SAMLAYELLVTQDQQKAGELAQILDSQNKERQAETNWIREQAAAQVLSQDPDALLFFAAD
PEFSEGVVGLAASRLTEAYYRPAIIAHQGEEFTVASCRSIPEFHITRALDECADLLVRHG
GHAAAAGFTVSNENLPLLIEQLYAIAQRELADVTLLPVIDIDREIILENLSPYYIGGIFN
DLHQLEPTGHGNPDPVFMSQDLVVRQARTVGRDNRHLKLTLQAGQYIYDAIAFGQGHWAD
ELPERIDIVYRFEENTYQGRVNLQLNVKDLRPSESQGELDSPVENRSMPG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacaacgcacaaccgattctcaaccagcgctggcgtgtccagccaaaaatc
ccccacgatattgacctggcattgcgcgacttccccccactcttgcgacagttgctttac
aatcgcggctattttaacgccgaatctgcgtccagttttgttaaaggtgaagcgcctttt
tcaagtgacccgctccagatcaaagacatgcgagctgcagtggatcgattgcaccgcgcg
gttacttctggtgaaaaaatcgccatctacggcgattatgacgccgatggggtcaccgcc
tgcgccctgatccatgatttcctggtgattctggacgtaaaaccggagatttacattccc
aatcgttacgatgaaggctatggtttaaacatggatgccattcaatccctggcagacatg
ggcatcaacctggtggtcacagtggattgcggtatccgctccaatcgtgaggtggcacag
gctcacaacctgggcatggacgtcatcatcaccgaccaccaccagcccggaacagaactc
ccccctgctctggctgtgatcaatcccaagcaacctgaagaccactaccctgaaaaagat
ttatcgggcgtgggtttagcgtacaaattgacccaggcttacctggaggttcacccccag
ccggatgtagaccctgaagcatggttggacctggtagccatcggcaccgtggcagacctg
gtaccgttgaaaggcgaaaaccgggcgttggttaaaaaaggactggcgcgcatccggcag
caaagacgcccgggattgagagccctggctggtacagcagaggttgatttaacgcagtgc
gacacgtcaatgattggtttcaagctggcaccccggttgaacgccgccggacggatggaa
tcggccatgctggcgtatgaactgctggtaacacaggatcaacaaaaagctggcgaactg
gctcaaatcctggattcccagaataaagaacgccaggcggaaacaaactggatccgcgaa
caggctgcagcgcaggttttatcccaggatccggatgcactgctgttttttgcagccgac
cctgaatttagtgagggcgtggtggggctggcagcctcgcgcctgacagaagcctattat
cgaccggcgattattgctcaccagggcgaagaatttaccgtcgcttcttgccgttcgatc
ccagaatttcacattacccgggctctagacgagtgcgccgatctgctggtgcggcatggt
ggtcacgccgcggctgcgggctttaccgtcagtaacgagaacctgccgctattaatcgaa
caactgtacgccattgcgcaacgggaattagctgatgtaactcttttacccgtgattgat
atcgaccgtgagatcattttagaaaatttatctccctattatatcggcgggatttttaac
gacctgcaccagttagagcccacagggcatggcaaccccgacccggtttttatgtctcag
gatctggttgtgcgccaggcgagaaccgttggacgggacaataggcacctgaagctgacc
ttgcaagccgggcaatatatctacgatgccattgccttcggacaagggcactgggctgat
gaactgcccgagaggattgatatcgtttaccgctttgaggaaaacacctatcagggtcgc
gttaatttgcaattgaatgtcaaggatctccgaccgtctgaatctcagggtgaactggat
tctcctgttgaaaatcgttcgatgccggggtaa
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integrated database retrieval system
