Brevefilum fermentans: CFX1CAM_0548
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Entry
CFX1CAM_0548 CDS
T04881
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
abat
Brevefilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abat03016
]
CFX1CAM_0548 (truA)
Enzymes [BR:
abat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CFX1CAM_0548 (truA)
Transfer RNA biogenesis [BR:
abat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFX1CAM_0548 (truA)
Prokaryotic type
CFX1CAM_0548 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
SMX53614
UniProt:
A0A1Y6K1T8
LinkDB
All DBs
Position
I:599071..599808
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AA seq
245 aa
AA seq
DB search
MGTALYKIILAYNGTAFAGFQRQAAARTVQAELETALEKLGWQGSTILAAGRTDAGVHAR
GQVVSFHLDWKHSPEDLRNALNHYLPKDMAVQFASEAPADFHPRFDAKWRHYRYRIYCQP
VRDPLRADFAWRVWPGVQVDRMNAAAADLVGSHDFRAFGSPMTEDGVTIREVFQATWSGD
GDEFYFDITANAFLFHMVRRIVFVLVTVGQNQAPTRVVAEGLTRGELALTGLAPSAGLVL
EAVGY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcactttacaaaattattcttgcttataacggaacagcatttgccgggttt
cagcggcaggctgcagcgcggacggttcaggctgaactggaaactgcgttggaaaagctc
ggttggcagggcagcacgattttggctgccggaagaacggatgcgggtgtgcacgccagg
ggacaggtggtcagcttccacttagactggaagcattcgcctgaagacctgcgcaacgcc
ctgaaccattacctgcccaaggatatggcggttcaattcgccagcgaggcgccagcggat
ttccatccccgttttgatgccaaatggcgccattaccgctaccggatctactgtcaaccc
gtgcgagatcccttgagagcagactttgcctggcgggtttggcccggggtgcaggttgat
cggatgaacgccgctgcggcagacctggtcggttcgcatgatttcagggcttttggcagt
ccaatgaccgaggatggcgtgaccattcgcgaagtgtttcaagcgacctggtcgggtgac
ggtgacgaattttatttcgacattactgccaatgcctttttgttccacatggtgcgacgg
atcgtgtttgtcctggtgactgttggacagaaccaggcgccgacccgtgtggttgctgaa
ggcttaacccgtggcgagttggcgctgacagggctggctccgtccgcgggcctggtgctg
gaagccgttggatattag
DBGET
integrated database retrieval system
