Candidatus Brevifilum fermentans: CFX1CAM_0711
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Entry
CFX1CAM_0711 CDS
T04881
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abat03016
]
CFX1CAM_0711 (truB)
Enzymes [BR:
abat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFX1CAM_0711 (truB)
Transfer RNA biogenesis [BR:
abat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFX1CAM_0711 (truB)
Prokaryotic type
CFX1CAM_0711 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
SMX53776
UniProt:
A0A1Y6K2I6
LinkDB
All DBs
Position
I:797597..798514
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AA seq
305 aa
AA seq
DB search
MSELDFNLKDTVSGVLVIDKPVGMTSHSVVQVVRQGTGIRRAGHTGTLDPRASGVLVVLL
GPAVRLSEYISASDKRYQAIIRLGETTDTFDGDGEVISRAPVDITLEEIEEALKKFEGRI
EQVPPAYSAKRIHGKKAYELAREGEEVELEPKEIDVYHLELLEWDPPEAIVDVFCSSGTY
VRSLANDLGEALGCGGHLVGLRRTKSGEFALRDAVQLRKLEEAFDYGDWYKYLIPAAEAL
ADWPSRELSTEEVDLVRHGHRVTSETPPENPDHWVRAISEQGELVALMEYLPEENEWQPR
KVFFT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactagactttaatcttaaagatacagtttcgggggtactggtgattgataaa
ccagtaggaatgacatctcatagtgttgtgcaggttgtgcgccagggaactggaattcgg
cgagccgggcataccggcacattggatccccgcgcttcgggggtactggtggttctgctt
gggccagctgtgcggctgagtgaatatatctctgcctctgataagcgttaccaggcgatc
atccgcctgggagaaacgactgacacctttgatggagatggcgaagtaatcagccgtgca
ccggtggatatcaccttggaagaaattgaggaagcgttgaaaaaattcgagggcaggatt
gaacaagttccgcccgcctattctgcaaagcgcattcacggaaagaaagcctacgaactg
gcacgcgaaggcgaagaagtagaattggaaccgaaagagattgatgtttaccatcttgaa
ctgcttgagtgggacccgcctgaagctattgttgatgttttttgttcttcgggaacctat
gtgcgctccctggcgaatgatttgggtgaagccctgggttgtggaggtcacctggttggc
ctgcgcaggaccaaaagcggtgaatttgccctcagggatgcggtccaacttagaaaactg
gaagaagcttttgattatggtgactggtataaatatttaatccctgccgctgaagccctg
gctgattggccctctcgtgaattaagcacagaggaagttgatctggtccgccatggtcac
cgtgtgacgagtgagaccccgcctgaaaacccggatcactgggtgcgggcgatcagcgag
caaggtgagctggtggcattgatggagtacctgccagaagagaatgaatggcaaccgaga
aaagttttcttcacttag
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