Candidatus Brevifilum fermentans: CFX1CAM_0854
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Entry
CFX1CAM_0854 CDS
T04881
Name
(GenBank) conserved protein of unknown function
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abat03016
]
CFX1CAM_0854
Enzymes [BR:
abat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
CFX1CAM_0854
Transfer RNA biogenesis [BR:
abat03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
CFX1CAM_0854
Prokaryotic type
Methylthiotransferases
CFX1CAM_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
T3SS_needle_E
Motif
Other DBs
NCBI-ProteinID:
SMX53919
UniProt:
A0A1Y6K5Q0
LinkDB
All DBs
Position
I:961067..962353
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AA seq
428 aa
AA seq
DB search
MKVFLDVIGCRLNQSEVEGFANQFRALGHEIVSSPSEADLAIVNTCTVTGKAAADSRKKL
RRASREGAGRVVATGCWATLEPETALNLPGVTQVIANADKEALVAILLNKSREEFSSLKY
RRVPLPGDRARTRAFIKVQEGCDNHCTYCLTRVARGSSRSMELSEICKDIQAALQGGAVE
IVLTGVQLGGWGRDFVQPLGLKDLIGHLLELPGITRLRLSSIEPWDFDPSMLSLWQDKRL
CRQLHIPLQSGSNRILKRMGRPISVQEYQDLLEEVRLRIPDVAITTDIITGFPGETEADF
QATVNVINKMAYAGGHVFTYSPRLGTAAYQMVDRVPAQLAKERNAILRDLFASSGQRYRE
GFFGRHLKVLWETSQQQEGGNYKLSGLTDNYIRVFSEAETDLWNRISIVNLDSHMPDGGG
VFGHIVNG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatttttagatgtgattggctgccgcttgaaccagagcgaggtcgagggattt
gccaaccaattcagagcactcggacatgagattgtctcatccccgtctgaggcagacctg
gcaatcgtcaatacctgcacggtgacgggcaaagcagccgccgattcgcggaaaaagctt
cgcagggcaagccgagaaggcgccggtcgggtggtagcaacgggatgctgggcaacgctt
gagcctgaaacagcgctgaacctaccaggcgtgacgcaagtgattgcaaacgccgataaa
gaagcccttgtggcgattttgttgaataagtcccgtgaggaattctcttctttaaaatat
cgccgcgtccctctgcccggagatcgagccaggacgcgagcctttattaaagtccaggag
ggctgtgataatcactgcacttactgtttaacccgagtggccagaggtagctcccgctca
atggaattatcggagatttgcaaagacatccaggcagcactgcagggcggtgctgttgag
atcgttttaacaggcgtgcagttgggcggttggggcagggattttgttcaacctttggga
ttaaaggatctcatcggtcatctcctcgaattgccagggatcacgcgtctgcgtttatca
tcgattgagccctgggatttcgacccgagtatgttatccctgtggcaggacaaacgattg
tgccgtcaactgcacatccctttgcaatcgggtagcaatcgtatattaaaaagaatgggc
agaccaatctcggtgcaggaataccaggatttgttggaggaggtccgccttaggattcct
gatgttgccattacaacggacattatcaccggttttccgggtgagacggaagctgatttc
caggccaccgtaaacgttatcaataagatggcctatgcaggggggcatgtttttacctat
tcgccacgactgggaaccgcggcctatcagatggtagaccgggtgccagcacaattagcg
aaagagcgcaatgcaattttacgggatttatttgcctccagtggtcagcgctaccgggag
ggctttttcggcaggcacctgaaggtgttgtgggaaaccagtcaacaacaggaaggtgga
aactacaaactatcaggattaaccgataattacatcagggtgttcagtgaggcagaaacg
gatttgtggaacaggatttcaattgtcaacctggattcgcatatgcccgatgggggtggg
gtttttgggcacattgtgaatggataa
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