Candidatus Brevifilum fermentans: CFX1CAM_1008
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Entry
CFX1CAM_1008 CDS
T04881
Name
(GenBank) putative Ribosomal RNA small subunit methyltransferase F
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abat03009
]
CFX1CAM_1008
Enzymes [BR:
abat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
CFX1CAM_1008
Ribosome biogenesis [BR:
abat03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CFX1CAM_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
SMX54073
UniProt:
A0A1Y6K332
LinkDB
All DBs
Position
I:complement(1116021..1117478)
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AA seq
485 aa
AA seq
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MADPGMHKLVQSLARFSEILSEEELQQIRAIQDAPLSTGIRLNSLKAHPATSIHALAERY
GWEIKPVAFCDNAWLIESASTSPGMTIEHRLGGYYLQDASSMVPVSLLDFEAQRPLILDM
AASPGGKTTHLVDRTQDMGFIIANDASQRRIPALRSVIANWGAINQVVTHFPGESFGRWF
PETFDSILLDAPCSMENLRPTPSHPLRETTDSERLRLQEMQIRLLISGLSALKIGGQLVY
ATCSLAPEENEAVIDQVLKLYPDALIIEDLSSKLPFHAPGLSTYADQIFHPALQNTLRLW
PHLTGMSGFFCARLRKTGVIPITPQAPPTRDFSRTQFEATPLNLQSAICEQIWDAYGFDL
GEILARYHLELFKRHEGIFLIPQVYLERFQTLPFEWIGMQIGQWIAGNFHPSLEFASRFG
HLFIRGKAQLDDSQLSQWIDQRDIRNPKIDLPPQGQYLLVEDKSGRNLGVGKLLSKRLRN
LLPRS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcccggcatgcacaaactggttcaaagtctggcgcgtttttcagagatcctc
agcgaagaagaactccagcaaatccgggcaattcaggatgcccccctgtccaccggtatt
cggctcaattcgctcaaagcgcacccggcaacatcgatccacgccctggcagaacgttat
ggttgggaaattaaacccgtcgccttctgtgacaacgcctggttgattgaatccgctagc
acctcacccggcatgacgatagaacaccgcctgggcggatattaccttcaggatgcatcc
tcaatggtaccggtcagcctgctggattttgaagcacagcgaccgttgatcctcgacatg
gccgcctctcccggtggaaaaacaacccacctggtcgaccgcacacaggacatgggtttt
atcatcgccaacgatgccagccaaaggcgcatccccgctttacgctccgtcatcgcgaat
tggggcgccatcaaccaggtcgtaacccattttcccggtgaatcctttggcagatggttc
cccgagacctttgatagcatcttgctcgatgccccctgcagcatggagaatctgcgccca
acacccagccaccccctcagagaaaccaccgattcagaacggcttcgtctgcaagaaatg
caaattcggcttctcatcagcgggttgagcgctctaaaaattggtggacagctcgtttac
gccacctgctcgctggctcctgaggaaaacgaggctgtgattgaccaggttctcaagttg
taccccgacgccctgattattgaagatctctccagcaagctgcccttccatgcccccggg
ctgagcacctatgcagaccagattttccatcccgcactgcaaaacactctgcgactctgg
ccgcatctgaccggcatgtcgggtttcttttgcgcacgtttacgaaaaacaggcgtaatc
cccataacacctcaggcgccccccacccgcgacttttctcgcacccagtttgaagcgaca
ccgctcaatcttcagtcggcaatttgtgaacagatttgggatgcttatggatttgacctt
ggcgaaatcctcgcccggtatcacctcgagctttttaagcgccacgaaggtatctttctc
attcctcaagtctacctcgaaagattccaaacgctcccctttgagtggattggcatgcaa
atcggtcagtggattgcaggaaatttccacccctcccttgaattcgccagccgtttcggt
cacttgtttatccggggaaaagcccagcttgatgattcgcaactttcccaatggatcgac
cagcgggatattcgcaaccctaaaatagatctaccccctcaaggtcagtatctgctggtg
gaagacaaaagcggtcgcaatctaggcgtgggaaaattgctctccaagcgcctgcggaat
ctcctcccccgaagttga
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integrated database retrieval system
