Candidatus Brevifilum fermentans: CFX1CAM_1015
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Entry
CFX1CAM_1015 CDS
T04881
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abat03009
]
CFX1CAM_1015 (rimO)
Enzymes [BR:
abat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CFX1CAM_1015 (rimO)
Ribosome biogenesis [BR:
abat03009
]
Prokaryotic type
ribosomal protein modification factors
CFX1CAM_1015 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5005
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
SMX54080
UniProt:
A0A1Y6K7S8
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All DBs
Position
I:complement(1123766..1125100)
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AA seq
444 aa
AA seq
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MTKQAKGTYHLVSLGCPKNLVDSESMSRLLNQRGLVASSIPEKSEYLIVNTCGFLTAARR
EAITILRSLVSEKQPWQKLIATGCMPELHRQELLDSVPGLDGILGTRRWMDILDLIDQVD
RHDRKRPYLHCSQITSDPVETRRVAIQGGSAYLKIADGCRRSCSYCLIPLIKGNLISRPI
DEIIKDAKALQDLGIKEIILIAQDTTDYGHDLGMQDGLTRLLEALLKAVPHIPWIRLLYA
FPGYVTDNLIQLMKNEAQVLPYLDIPLQHADPAVLRAMRRPSDIEAVSRAIAHIRAEIEG
IALRTTMIVGFPGEDDLAFQRLVDFVQTQRFDHLGTFAYSFEPGAPAEPLGDPISEDTKA
DRVEQLMHIQAEISLARNQSFIDKVLDVIIEGIDDENRISIGRSYRDAPEIDGLVIVEGI
APIGEIVAVKIHSAITYDLIGKLV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacaggctaaaggaacttatcacctggtttccctgggctgtccaaaaaacctg
gtggattcagaatcaatgtcccggctgttgaatcagcgtggattggtcgcttccagtatc
ccagaaaaatcagaatacctgattgtcaacacctgcggatttttgactgcagcccgccgg
gaagccatcacaatactccgaagtctggtcagtgaaaaacagccctggcagaaattgatc
gctaccgggtgcatgcccgaactgcaccgtcaggaattactcgattctgtgcccggtttg
gacgggatcctgggtaccaggcgctggatggacatcctggacctcattgatcaagtcgat
cggcatgatcggaagagaccgtatttacattgctctcaaataacctcagatccagttgaa
acacgccgtgtggctatccagggtggcagcgcctatctaaaaatcgctgatggctgccgc
agatcctgttcttattgcttgatcccattgattaaaggcaatctgatcagtcgcccgatt
gatgaaattattaaggacgcaaaagctttacaggatcttggaatcaaggagatcattctc
atcgcccaggataccacagattatgggcacgatttggggatgcaggacgggttaacccgg
ctgttagaagctctgctcaaggcagttccccacattccctggatccgcttgttatatgcc
tttccaggttatgtgacagacaatctaatccagttgatgaaaaatgaagcacaagtcctc
ccctacctggatattcccctccagcacgctgacccggctgtcctgcgtgcgatgcgtcgc
ccatccgatatcgaggctgtctcccgggcaattgcccacatccgtgccgaaatcgagggt
attgccctgagaacaacgatgattgtcggttttcccggtgaggatgacctcgccttccaa
aggttggtggacttcgtccaaacccagcgttttgatcacctgggaacgtttgcctattcc
tttgaaccgggtgctcctgccgagcccctgggcgacccgatctcagaagacaccaaagcc
gatcgggttgaacaactcatgcacattcaagctgagatctctttagcgcgtaatcaatcc
ttcatcgataaggtgctggatgtcattattgaaggcatcgacgatgaaaaccgaatctca
attgggcgatcctaccgggatgcccccgaaattgacggcttagttatagttgaaggaatt
gccccgattggtgaaatagtggcagtgaagatccatagtgcaatcacctacgacctgatc
ggtaaactcgtctga
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