Candidatus Brevifilum fermentans: CFX1CAM_1080
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Entry
CFX1CAM_1080 CDS
T04881
Symbol
lcfA
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat00061
Fatty acid biosynthesis
abat00071
Fatty acid degradation
abat01100
Metabolic pathways
abat01212
Fatty acid metabolism
abat02024
Quorum sensing
abat04146
Peroxisome
Module
abat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFX1CAM_1080 (lcfA)
00071 Fatty acid degradation
CFX1CAM_1080 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFX1CAM_1080 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFX1CAM_1080 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
abat01004
]
CFX1CAM_1080 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abat04147
]
CFX1CAM_1080 (lcfA)
Enzymes [BR:
abat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFX1CAM_1080 (lcfA)
Lipid biosynthesis proteins [BR:
abat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFX1CAM_1080 (lcfA)
Exosome [BR:
abat04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFX1CAM_1080 (lcfA)
Exosomal proteins of breast cancer cells
CFX1CAM_1080 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7354
CIP2A_N
Motif
Other DBs
NCBI-ProteinID:
SMX54145
UniProt:
A0A1Y6K380
LinkDB
All DBs
Position
I:1194041..1195648
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AA seq
535 aa
AA seq
DB search
MDQTKPWLAQYDEGVPAEVEIPNRSLVDLFADAVRESGDATCTIYEGEELTYQQVDDFSE
RIAAYLLDQGLKTGDRVGILLPNSPAFVISFFGILKAGGVVMALNPAFRLAEIETQTIES
GIRVLILKEAFYTTVKTQPFMNDIRTVVVDSEAGTVLPDGDTTWEKIMEAFAGCVPVNVD
INPDDPAVFQYSGGTTGIPKCAIGLHRNLVANVYQFNHWLVNTEPGKETILVAIPVYHVY
GMVLGLNLAVKMRARMVLIPDPRQLDYLLDAIQTYQASIFPGVPSLYAAINHYPPVLEGK
YDLSSIKACISGSATLPIKVKHEFEALTRGHLVEGYGLSEAPTATHCNPILGENREGSIG
LPLPNVDCKVVDLESGEHEVEIGEIGELIIKSPQVMAGYHRRPEETALTLRNGWLFTGDV
VRMDQDGYFYIVDRKKDVIKVGGFQVWPNEVEAVINKHPKVKEVAVAGVVDEHGNEATKA
WVVLKPGEESSTEEIRSFCDQYLTRYKIPKHIVFIDELPRTTVGKVLRRVLASEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacaaaaccctggttagcccaatatgatgaaggcgtccccgctgaggtggag
attcccaaccgctcgctggttgacctatttgctgacgcagttcgagaatcaggagatgca
acctgcacaatctatgaaggagaagagctgacttatcaacaggtcgatgatttctctgaa
cgaattgcagcgtacctgcttgaccagggcttaaaaacaggagaccgggtaggcatcctg
ttgccgaactctccggcttttgtaatcagttttttcggaatacttaaagcgggtggagtg
gtgatggcgctgaacccggctttccggctggcagaaattgaaacacagactatcgaatca
gggattcgcgttctgatattgaaagaagctttttacacgacagttaaaacccagcctttt
atgaacgacatcagaacggttgttgtcgactcggaggctggcacagtccttccagatggt
gatacgacctgggaaaaaatcatggaagcctttgccggttgtgtgccggtgaatgtcgac
atcaatcctgacgacccggcggtgttccagtattcgggcgggacaactggcatacccaaa
tgcgcgatcgggctgcatcgcaacctggttgcgaatgtttaccaatttaatcactggctg
gtgaataccgagcctggaaaagaaaccattttggtggcaattcctgtttatcatgtatac
gggatggtcttgggcttaaacctggctgtaaaaatgagggcacgcatggtgctgatccct
gatccaaggcagcttgactacttattggatgcaatccagacctaccaggcttcaattttc
cctggtgttcccagtttgtatgcagcgatcaatcattatccacctgttttagagggaaaa
tatgatctatcttcgataaaagcctgcatttcaggctctgcgacgctgccgatcaaagtc
aagcacgaattcgaagcgctcacccggggacacctggttgaaggctatggcctttctgaa
gcgcctacggccactcattgtaatccaattcttggtgagaaccgtgaaggttctattgga
ttgccgctcccgaacgtggattgtaaagtcgttgaccttgagtccggagagcatgaggtt
gaaattggggagattggcgaattgatcatcaaaagtccacaggtgatggccggatatcat
cggcgcccagaagaaacagcgctgaccttgcgaaacggctggctgtttaccggagacgtc
gtacggatggaccaggatgggtatttctacattgttgatcgaaaaaaagatgtgattaag
gtggggggatttcaggtgtggccaaacgaggtagaagcggtgatcaacaaacatcccaag
gttaaggaggttgctgttgccggggtggttgatgagcatggaaatgaggcaacaaaggcc
tgggtggtgctgaagccgggagaagaaagctcaaccgaagaaattcggagcttttgtgat
caatacctcacgcggtacaaaattcccaaacacattgtgttcattgatgaactcccgcgg
acgacagtcggaaaggtgttaaggcgagttttagcgtctgaggagtaa
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