Candidatus Brevifilum fermentans: CFX1CAM_1190
Help
Entry
CFX1CAM_1190 CDS
T04881
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat03030
DNA replication
abat03430
Mismatch repair
abat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFX1CAM_1190
03430 Mismatch repair
CFX1CAM_1190
03440 Homologous recombination
CFX1CAM_1190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abat03032
]
CFX1CAM_1190
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_1190
Enzymes [BR:
abat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFX1CAM_1190
DNA replication proteins [BR:
abat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFX1CAM_1190
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFX1CAM_1190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SMX54255
UniProt:
A0A1Y6K3K1
LinkDB
All DBs
Position
I:complement(1325320..1328397)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNLAYLRTHSYYSLLESLLSPEDLALTAQEFDIHALALTDYQYLTGAIEFYEACLQAGVK
PILGLEIDLTYHGHTGRIGFLAKDKEGWSNLSRLSSITLVDNRSIDCDTLHAHRAGLICT
LGGKNGLFRELFFNTPAELKLSQHLLSDLKTIFDQDCFFEIQRYANGPLKNEQAVIQIAR
QLDLPLVASQNIHYRDPKDHALFQTLSAIRQNKPIAQQLKKDRLSLPLHFPTRADFLHRF
QDYPDALTNLSHIVDRCNVDLPIGQTHFPTFPTPDGVSQSDYLRMRAYGGAKRIYHQITP
EIKARLDQELAIISEMGYEPIFLIMEDVLEQTRHLGIPTSSRGSAASSLVAHVLNITSPD
PIALNLYFERFLNPARKKPPDIDTDIASHRRDEVIKYVFEKYHPDQVAMVGTINRYRPKS
ALVDVAKAYGLDPATVRQLSNKLPSSFTYRSIPEVDSADPFSSLLGEGVNPIIKDIVNDA
KAILDMPRHLSVHPGGIVIAPFPIKDLIPIMHSTSLGVNHTQYDLLGIEKLGMVKIDLLG
VRGLTVLGEVAEQIQSWHQKEYQNSFQVLEQIPQDDSKTAITISTAKTIGCFQVESPGMR
ATLREIGAKSVEDIMTALALYRPGPLRGGLRDAFVRRFREEEAVIHIHESLEDLLSETQG
VILYQEQVLRIAHELGGLSIAQADLLRRAMSHFDAGNVMDTLRENFITGAIHRKAVPFET
AERIWEMMAAFAGYGFPKAHAASYAQLAWNSAWCKTHYPAEFMCAVLGFGGGYYSQRVYL
MEARRLGLKVNPPHVNHSNERFRTIYPNGLPILYMGLGQVRDLTQKTIRKIIDQRPFYSL
DDFLIRVDPHRKEARNLLLCSAFEGLTTIPAGLDHIKHQHIPGQFNLFSEPQTDEDWDLT
QKAKAAQEVLGISLEISPLEQFADQIQSVGAVSTLEAENLIGEKIFLAGMRQAFRRFRNK
SNQMLGLLTLEDLEGSISVFFPADIFRQSQMTLAEQGPFLVEGYVEKDERSHRIRVIAKR
IHLLS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagcttatcttcgcacccattcatattatagtcttctcgaatccttactttca
ccagaggacctggcactcaccgcccaggaattcgacatccacgcgctggcgttgaccgat
taccagtacctgactggcgctattgaattctatgaggcatgcctacaagcaggcgtcaaa
cccattctcgggcttgaaattgatcttacttatcatggtcacaccggaagaattggattt
ttagcaaaagataaagagggttggtcaaacctctctcggctgagttcaatcaccctggtt
gacaaccgttcaatcgattgtgacacgctccatgcacatcgagcgggtttaatctgtact
ctgggaggtaaaaatggtttattcagagagctgttcttcaatactcctgccgaattgaag
ttgtctcagcacttgctctctgacctgaaaacgatttttgaccaggactgttttttcgaa
atccagcgttatgctaatggaccattaaaaaatgaacaggctgtcatacaaatcgccagg
cagctcgacttgccgttggtagccagccagaacattcactatcgcgatccgaaggatcat
gctcttttccaaacgctctctgcaattcgccaaaacaaacccattgcacaacaactcaag
aaagaccgattgagtcttccacttcattttccaaccagggcagacttcctccacaggttt
caagattatcctgacgcgctcaccaacctctctcatattgttgaccgctgtaatgttgat
ctaccaatcgggcaaacccatttcccaaccttcccaacgcctgatggtgtatcccaatca
gattatcttcgaatgcgcgcttatggtggcgctaaaaggatttatcatcagatcacacca
gaaatcaaagcgcgtctcgaccaagagcttgcgatcatctctgaaatgggctatgaacca
atctttctaatcatggaagacgttctcgaacaaacacgtcatttaggcattcccacatcg
tcacggggctcagcagcatcctcactggtggcacatgtgcttaacatcaccagcccggat
cccatcgctctaaatctgtactttgaacgtttcttgaaccccgcacgtaaaaaaccaccg
gatattgacacggacatagcatcacaccgacgagatgaggtgattaaatatgtgttcgaa
aaataccaccctgaccaggttgctatggttggcacaattaaccgctacaggcccaaatca
gcattggttgatgttgccaaagcttatgggcttgatccagcaacggtgcgccaactttca
aataagctcccatcatcttttacttacagatccatacctgaggttgactctgccgatcca
ttttcatcacttttaggagagggtgtaaaccccattatcaaagacatcgtcaatgatgca
aaagccatccttgacatgccacgccacctatcagtccacccgggcgggattgtgatcgcc
ccatttcctataaaggacctgattcccatcatgcattcaacttctcttggtgttaatcat
acacagtatgatcttttgggaattgaaaagctcggcatggtaaaaattgatttactgggc
gtccgcgggctgaccgttttaggcgaagtcgctgagcaaattcaatcctggcatcaaaaa
gaataccagaatagttttcaagtccttgaacaaatccctcaggatgactccaaaactgct
atcacgatctcaactgcaaaaacaattggttgtttccaagttgagagcccgggcatgcgc
gctaccctgcgagagatcggggcaaaatcagtcgaagacatcatgaccgcactggctttg
tatcgtccagggccgcttagaggaggtctgagggatgcctttgtccgccgttttcgcgag
gaagaagcggtaatccatattcatgaatctcttgaagatttgttaagcgaaacccagggg
gttattctgtatcaggaacaggtattaaggattgcacatgagttgggtgggctttccatc
gcacaggcagatcttttacgacgcgcgatgagccattttgacgctggaaacgtcatggac
accttacgggagaattttattacaggtgctatccaccgaaaagccgttccttttgaaacg
gctgaacgcatctgggagatgatggctgcttttgccggctatggttttcctaaagctcat
gcagcctcgtatgctcaactcgcctggaattccgcctggtgcaagacccattacccagca
gaatttatgtgtgctgtgctgggctttggaggaggctattattctcaacgagtgtacttg
atggaagcccgccgattaggtctgaaggttaatcccccgcacgtcaatcattccaacgaa
cggttccgtaccatttatcccaatggactgcccatcctttatatggggttagggcaggtt
cgagatctgacacaaaaaacaattcgaaagatcatcgatcaacgtcccttttactccctc
gacgactttttaatcagagtggatccgcaccgcaaagaagcccgcaatttactcctgtgc
agcgctttcgaggggctgaccacgataccagccggactagaccatatcaaacatcagcac
attccaggtcaattcaatcttttttccgagccccaaactgatgaagactgggatctgaca
caaaaggcaaaagcagcacaggaggttttaggcatcagcctggagatctctccacttgag
caatttgcagatcaaatccagtcagttggtgcggtgtccacccttgaagcagagaatctt
atcggagagaagatattcctagcaggcatgcgtcaagcttttcgtcgtttccgcaacaaa
tcgaatcagatgctgggcttattaacccttgaagacttggaaggttcgatttccgtgttt
tttccggcggatatctttcgacaatcgcaaatgaccttggctgagcaaggacccttttta
gtggaaggctatgttgaaaaagatgaaagatcgcaccgtatcagagtaattgcaaaacgg
atccacttgctgtcctga
DBGET
integrated database retrieval system
