Candidatus Brevifilum fermentans: CFX1CAM_1427
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Entry
CFX1CAM_1427 CDS
T04881
Symbol
rnc
Name
(GenBank) Ribonuclease 3 1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFX1CAM_1427 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abat03019
]
CFX1CAM_1427 (rnc)
03009 Ribosome biogenesis [BR:
abat03009
]
CFX1CAM_1427 (rnc)
03036 Chromosome and associated proteins [BR:
abat03036
]
CFX1CAM_1427 (rnc)
Enzymes [BR:
abat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CFX1CAM_1427 (rnc)
Messenger RNA biogenesis [BR:
abat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFX1CAM_1427 (rnc)
Ribosome biogenesis [BR:
abat03009
]
Eukaryotic type
90S particles
RNase
CFX1CAM_1427 (rnc)
Prokaryotic type
rRNA processing factors
CFX1CAM_1427 (rnc)
Chromosome and associated proteins [BR:
abat03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CFX1CAM_1427 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
SMX54492
UniProt:
A0A1Y6K448
LinkDB
All DBs
Position
I:complement(1589605..1590384)
Genome browser
AA seq
259 aa
AA seq
DB search
MRKLFTLDGLRISSSGKGPRTMTEDVKTESAEQFSKRLKLPFTDFFLLTRALTHRSYLNE
NKDAIEDNERLEFLGDAVLDFMVAEWLYHLFPEKPEGDLTRLRAALVHTEQLANFARKIN
LGLALQLGKGEIQAGGRERTTLLCDTFEALIGALYLYAGMPAVEAFMEPLLLEVVDSILQ
NHIAEDTKSRLQEWAQGRGLASPKYILVAEEGPDHNKTFEMEVRIGNKSYGRGIGSNKQS
AEKSAAREALVSLGILEHN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagctatttactttagatggcctgcgcatcagtagttctggtaaaggacccaga
actatgactgaagatgtcaaaaccgaaagcgcagagcagttttcaaaacgtttaaaactt
ccttttacagacttctttttattaacaagggcgttaacccatcgctcgtatttgaatgaa
aataaggacgcaattgaagacaatgagcgccttgaattcttgggtgatgcagttcttgat
ttcatggtggctgagtggctgtaccatctctttcctgagaaaccagaaggtgacctgact
cgtctgcgagccgcattggttcatactgaacaattagccaattttgcgaggaaaataaat
ttaggtttggctttacaattggggaaaggcgaaatacaagctggaggacgggagcgcacc
actctattatgcgataccttcgaggcgttgattggtgcgctatacctgtacgcaggtatg
ccagccgttgaagcttttatggaaccgctcttgttagaagttgttgacagcattcttcaa
aatcatatcgctgaagataccaaaagtcgccttcaagaatgggcgcagggaaggggctta
gcttcacccaaatatatcctggtcgctgaagaaggtcctgatcataataaaacctttgaa
atggaagttagaattggtaataaatcctatggcagagggatcggctcaaataagcaatct
gcagagaaatccgcggcgcgggaagcgctggttagccttgggattctggagcacaattaa
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integrated database retrieval system
