Candidatus Brevifilum fermentans: CFX1CAM_1543
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Entry
CFX1CAM_1543 CDS
T04881
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
abat
Candidatus Brevifilum fermentans
Pathway
abat03030
DNA replication
abat03430
Mismatch repair
abat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFX1CAM_1543 (dnaX)
03430 Mismatch repair
CFX1CAM_1543 (dnaX)
03440 Homologous recombination
CFX1CAM_1543 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abat03032
]
CFX1CAM_1543 (dnaX)
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_1543 (dnaX)
Enzymes [BR:
abat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFX1CAM_1543 (dnaX)
DNA replication proteins [BR:
abat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFX1CAM_1543 (dnaX)
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFX1CAM_1543 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_5
AAA_30
ResIII
AAA_19
AAA_16
Rad17
Mg_chelatase
AAA_7
AAA_14
RCF1-5-like_lid
PIF1
ORC-CDC6-like
AAA_24
AAA_18
AAA_assoc_2
AAA_11
AAA_2
AAA_28
PADR1_N
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
SMX54608
UniProt:
A0A1Y6K6U2
LinkDB
All DBs
Position
I:1711740..1713446
Genome browser
AA seq
568 aa
AA seq
DB search
MTQALYRKWRPQGWEEVIAQEHVTQTLKNAVANDRVAHAFLFAGPRGTGKTTTARILAKA
VNCLEPDLSMRPCNACAHCQALNSGRFMDLIEIDAASNTSVDDVRDLREKINFSPSQGRF
KVYIIDEVHMLSNAAFNALLKTLEEPPPHAIFVLATTEIHKIPATVLSRCQRHEFRRIPI
SSMISYLKEKAHAEELNVDESVFTEIARQATGSLRDAVSLLDQLTSSDEHITLEMAQQVL
GTATSLRVIEVIDALLAKDTQTGLSLISNALDSGADARQFSRQIVTYLRNVLLYKMNNKI
QVEAVETIKDALEKHASQFSMRELLEAINGFNAATTQEHFNWHPGLGLELAFSSYLAQPE
PELGAPRVDVDLVKVAKPSLTAAENLKASKEKVEDTTPAPQITPVPKAEKLVDKADLEAI
DLVTHEAAEPETVANAAVTSTASLQDAGGISFSDIQKAWPKIKALVKKHNPRTEGLLNSS
KLTGIRENVVILGFSSNLLKEMMEKEGNLTLTMDILEEVLGQPLLIKCIVSTHDGNPIPD
DLKIEEDGMVSTATRDLGGRISRAKEEK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcactttatagaaaatggcgcccacagggttgggaagaggtaatcgcccag
gaacatgtgacccagacgcttaaaaatgctgtcgccaatgaccgagttgcccatgcattc
ttattcgccggtccacgcggcacaggcaaaacaacaaccgcacgtatactggcaaaggct
gtcaactgcctcgaaccggacctctccatgcgtccatgtaatgcctgtgcacactgccag
gctctcaattctggacgattcatggatctcatcgaaatcgatgccgcttcgaataccagc
gtcgatgatgtcagagacctgcgcgaaaagatcaacttttcaccatcacagggacgtttc
aaggtttatatcatcgatgaagtccacatgctttcgaatgcagccttcaatgccctccta
aagacgctggaagagccacctccccacgcaatttttgtcctggccaccacggaaattcac
aaaattccggcgacggtgctctcacggtgtcagcgtcatgaatttcgccggattcctatt
tccagcatgatctcatacttgaaagaaaaagctcacgctgaggaactcaatgtagacgaa
tccgtctttactgagatcgccaggcaagccaccggcagcctgcgggatgcagtttctttg
cttgatcagctcacatcctcagacgagcacatcacgcttgagatggctcaacaagtttta
ggcacagccaccagtttgcgggtgattgaagtcatcgacgcactgctggcaaaagacact
caaacaggtttgtccttgatcagcaatgcgttggacagcggcgcagatgcgcgccaattt
tcgcgacaaatcgtaacttatcttcgaaacgttcttctttacaaaatgaataacaaaatc
caggttgaagcggtcgagaccatcaaagatgcactcgaaaaacatgcctctcaattttca
atgcgagaattactggaagccattaacggattcaatgcagcaaccacccaggaacatttc
aactggcatccagggttggggctcgaattagcctttagcagttatttagcccaacccgag
ccagaattaggcgcccctcgagtggatgtcgacctggttaaagtcgcaaaaccatctctg
acagcagcagaaaatttaaaagcatccaaagagaaagtcgaagacacgactccagcccca
caaatcacccctgtcccgaaagctgaaaagcttgtcgataaagcggaccttgaagcaata
gatctcgtgacacatgaagcggcggaaccagaaaccgttgcaaatgctgcggtcacaagc
accgcatccttacaggatgctggaggaatcagcttcagcgatatccaaaaagcctggccg
aaaattaaagccctggttaaaaaacacaaccctcgaactgaaggtctgctcaactcgtcg
aaactgactggtataagagaaaatgttgtgatccttgggttttcatctaacctgcttaag
gaaatgatggaaaaagaaggcaacctcacgctgaccatggatattctcgaagaagttctg
ggccagcctttattaatcaaatgtattgttagcacacacgatgggaatccaattcccgac
gatttaaagatcgaagaggatggaatggtgagtacagcaacacgtgatctgggtggtaga
atcagccgagcaaaagaagaaaaataa
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