Candidatus Brevifilum fermentans: CFX1CAM_1697
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Entry
CFX1CAM_1697 CDS
T04881
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abat03032
]
CFX1CAM_1697 (topA)
03400 DNA repair and recombination proteins [BR:
abat03400
]
CFX1CAM_1697 (topA)
Enzymes [BR:
abat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFX1CAM_1697 (topA)
DNA replication proteins [BR:
abat03032
]
Prokaryotic type
DNA Topoisomerases
CFX1CAM_1697 (topA)
DNA repair and recombination proteins [BR:
abat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFX1CAM_1697 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF5679
Toprim_4
Zn_ribbon_GRF
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
SMX54762
UniProt:
A0A1Y6K4X7
LinkDB
All DBs
Position
I:complement(1917450..1919771)
Genome browser
AA seq
773 aa
AA seq
DB search
METYCVKCRQKRELIEPVAGFNAAGGPVTRGVCAHCGTKMVRMGRTEAHEGLPQPEVKRK
KEIVRKGNLVIVESPAKAKTVNRFLGKGYTVRASIGHVRDLLRSKLSVDIDNDFTPQYRV
PKEKREVVKEIKELAQKAESIYLATDPDREGEAIAWHLMEAAGIDAERTHRVVFNEITED
AVKHAFANPRGIDMDLVDAQQTRRILDRLVGYGISPILWKKVRSRLSAGRVQSVALRLVV
EREREIDAFDPVEYWSIDADLLPEGGQVAYRARLVKINGDDPQLGNQALVEPILADMRSA
AYTVEAIKHGKRKRNPPPPFITSTLQQDASRKLGFTARKTMAVAQQLYEGIELDGMGTTG
LITYMRTDSTNISKIATDEVRQYIKTQYGDMYLPEKPPVYKTRAQSAQEAHEAVRPTSIH
RTPKTIRMYLTRDQFKLYQLIWQRFIASQMTPAIYKTLSVDVRGEGDQSLYLLRASGSQL
EFQGFMYIYEEGKDEDHTEEDEGASDRIPIDDIKEGQPQSLQELYPEQHFTQPPPRYTEA
SLVQALEENGIGRPSTYAPILTTIQNRGYVLRNDKRLVPTEIGYLVNDLVVEFFPNVVDI
GFTSSLENQLDMIAQGDTTWVEVIREFYATFGELLAHAEAAMPEKKAEPERVGRTCPECG
HDLILRWGRYGRFISCSNFPECRYTEPYLEKIGMTCPVCAQGDVVRRKTKRGRTFYGCSR
FPDCDFTSWKQPIPQRCPNCQGTLVLSNERLVECMQCKATFSRDEIMDDHDVA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacctattgtgtaaaatgccgccaaaagcgggaattaattgaacccgtcgcgggt
tttaatgctgcaggaggcccggtgaccaggggtgtctgtgctcattgcggcactaaaatg
gtgcggatgggtagaacagaggcacatgagggattaccgcagcctgaagttaaacggaaa
aaagagattgtgcgcaaaggcaatctggtgattgtggaatcgcctgccaaggcaaaaacg
gtcaaccggttcctgggaaagggctacacggtgcgtgcatccattggtcatgtgcgcgat
cttctgcgttcgaaattatccgtggatatcgacaacgattttacgccccagtaccgggtg
ccgaaagaaaagcgggaagttgttaaggaaattaaggagttagcgcaaaaagccgaatcg
atttacctggcaactgatcctgaccgcgagggcgaagcaattgcctggcatctgatggaa
gcggcgggaatcgacgcagagcgcacccacagggtggttttcaatgagatcacggaagac
gctgttaagcatgcctttgccaacccgcggggaatcgacatggacctggtcgatgctcag
caaacacgccgtattctggatcgtttggttggatacgggatcagccccatattgtggaag
aaagtgcgcagtcgactttctgccggacgggttcaatccgttgccttgcgattggttgtt
gaacgcgagcgtgagatagacgcctttgacccggttgaatactggtcaatcgacgcggat
ttactgcctgagggcgggcaggttgcctatcgcgcccggcttgtcaaaatcaatggtgat
gatccgcaactgggcaatcaagcgcttgtggagcccattctggctgacatgcgctcggca
gcatatacggttgaagccatcaagcacggaaaacgcaaacggaacccaccgccgcctttt
atcaccagcacattacagcaggatgcctctcgcaaactgggattcacggctcgtaaaacc
atggcggttgcacaacaattgtatgagggcattgagctggacggaatgggaaccacgggt
ttgatcacctacatgcggaccgattcgaccaatatctctaaaattgccacggatgaggtg
cggcaatatatcaagacgcaatatggcgacatgtacttgccggaaaaaccaccagtgtat
aagactcgtgcccaatccgcgcaggaagcgcatgaggctgtgcgtccgacatccattcac
cggactcctaaaacgatcaggatgtacctgacgcgagatcaattcaaactttaccagttg
atctggcagcggtttattgcttcccagatgacgccagcgatttataaaactctatccgtc
gatgtccggggggagggcgatcagagcctgtatttgttgcgggcttccggaagccagctt
gaatttcaggggtttatgtatatttatgaagaaggaaaggatgaagaccatacggaagag
gatgagggcgccagtgatcgcatccctatcgatgatattaaagaaggacaaccacaaagc
cttcaggaactctatcctgaacagcactttacacaacctccgccgcgttatactgaggct
tccctggtccaggcacttgaggagaatggcatcggacgcccttcgacctatgcaccgatc
ctgaccacgattcaaaatcgcggttatgttctcagaaatgataaacgccttgttccgact
gaaatcggttacctggtgaacgatctggtggtggagttcttccccaatgtggtcgacatt
ggttttacttcaagtcttgaaaatcagttggatatgattgcacagggtgataccacctgg
gtggaggtgatccgagaattttatgcgaccttcggtgagcttctggcgcatgctgaggca
gctatgccggaaaagaaggctgagccggagcgggtaggacgaacttgcccggagtgcggt
catgatttgattctgcgttggggccgctacggcaggttcatcagttgcagtaacttccct
gaatgccgctatactgagccttaccttgagaaaattggcatgacatgcccggtgtgtgca
cagggtgatgtggtcaggcgcaagacaaaacgcggacgaaccttttatggatgttcccgc
tttccggattgtgattttacttcgtggaaacaacccattccacagcgatgtccaaactgc
cagggcacactggttttgtccaatgaacgccttgtggaatgtatgcaatgcaaggcgact
ttctcgcgagatgaaatcatggatgatcatgatgtggcataa
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