Candidatus Brevifilum fermentans: CFX1CAM_1921
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Entry
CFX1CAM_1921 CDS
T04881
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abat03016
]
CFX1CAM_1921 (miaB)
Enzymes [BR:
abat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CFX1CAM_1921 (miaB)
Transfer RNA biogenesis [BR:
abat03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CFX1CAM_1921 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Fer4_12
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
SMX54986
UniProt:
A0A1Y6K5Y1
LinkDB
All DBs
Position
I:2165178..2166461
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AA seq
427 aa
AA seq
DB search
MNVADSHRLASALEKMGYEPTRQPHHADVIVLNTCVVRQSAEDKAIGRLSSLRPLKDRNP
NLVVNLMGCLIGVRGNQKILERFPWVDVVSPPSDPEPLIRYLVERSAKQTSQINQAQINA
LLDGDIILPKADQGRLVSAFIPIVYGCSHACTYCIIPSKRGIEHSRPYDEILNEVNSFAR
QGVKEVTLLGQIVDRYGLDLPEPTTLSALLHDLHKIEGIKRIRFLTSHPNWMTDELLEAV
QTLPKVCPHIEVPIQSGDDVILKAMRRGYTVNAYRDLIARIRQRIPDVAIATDIIVGFPG
ETPEQFDNTYALLADLRMDVAHLARYSPRDGTFSARKLVDDVSDAEKTRRFRKLEELQEE
IASEINARLLGKTVNVLFEAQKRGRWRGRTPTNKLVFVDSPHDLLGQERSVTIEWTGPWS
LIGTLTS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagattcacaccggctggcttctgcactggaaaagatgggatatgaaccc
acccgccaaccgcaccacgccgatgtcatcgtgttaaatacctgtgtggttcgccagagc
gctgaggataaagccatcggacggctcagctctttgcgccctttaaaagatcgcaatcca
aacctggtggttaacctgatgggctgcctgattggcgtacgtggcaaccagaagatcctg
gagcgcttcccctgggtggacgttgtttcaccaccttcggacccagaaccgctgatacgc
tacctggttgagcgctccgccaaacaaaccagccaaatcaaccaggcccaaatcaacgcc
cttctcgacggggatatcatcctccccaaagcagatcagggcaggctggtttcggcgttt
attcctattgtttatggatgttcccacgcctgtacctattgcatcatcccgtctaaacgt
ggtatcgaacattctcgcccctatgacgagatcctcaatgaggtcaacagttttgcccgg
cagggagtcaaggaagtcacacttttagggcaaatcgtggatcggtatggcctcgacctg
ccagagcccaccacgctctccgccttattgcacgacctgcataagatcgaaggcatcaag
cgcattcgttttctgacctcacaccccaattggatgaccgatgaattgttagaggctgtg
cagaccctgcccaaggtttgcccgcacattgaagtgccaatccaatccggggatgatgtg
atcctgaaagccatgcggcgcggttataccgtcaacgcttaccgcgacctgatcgccagg
attcgccagcgcatccccgatgttgccattgctaccgatatcattgttggttttcccggc
gagacccctgagcaattcgacaatacctatgccctgctggcggatctgcgcatggatgtg
gcgcacctggcacgctattcacctcgcgacggcaccttttctgcccgcaagctcgtggat
gatgtgtctgatgccgaaaaaacgcgccgctttcgcaaactcgaggaattacaagaggaa
atcgccagtgaaattaacgcccgcttgctggggaaaacggtgaatgtgctctttgaagct
caaaagcgcgggcgctggcgcggccgcacgcccaccaataaattggtttttgtggatagc
ccgcatgacttgctgggtcaggaaagatccgtcacaatcgaatggacaggcccctggtcg
ctaatcggaacccttacatcataa
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