Candidatus Brevifilum fermentans: CFX1CAM_2012
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Entry
CFX1CAM_2012 CDS
T04881
Name
(GenBank) putative 23S rRNA (Uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abat
Candidatus Brevifilum fermentans
Brite
KEGG Orthology (KO) [BR:
abat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abat03009
]
CFX1CAM_2012
Enzymes [BR:
abat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CFX1CAM_2012
Ribosome biogenesis [BR:
abat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFX1CAM_2012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
RrnaAD
DUF6093
Motif
Other DBs
NCBI-ProteinID:
SMX55077
UniProt:
A0A1Y6K8D0
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All DBs
Position
I:complement(2268623..2269855)
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AA seq
410 aa
AA seq
DB search
MADMFEITFEKMVSGGDCMGRLPDGRALFVPFVLPGETVRVAVVDEKKRYARGWPVEVLS
PSPERIAPRCIHFGECGGCQYQHLDYESQLRLKEALLRDQFQRIANLENPPIQPMVPAPN
PWNYRNHVQFHLSQAGELGFVHADGEHLLVIEECHLPQTGINTLWPQLDFGAESGVYRLG
VRQNSFEDIMLILEGDDPQAPEFSEDIPVSAVYTPPEARLTVLAGDDHQVFTLLGRHFQV
SARSFFQVNTPMAEKMITYLLENISMTQYMQAVELYAGVGAFSAFIAPRVGHLTAIENSG
SACHDFAVNLDEFDNVSLYEAEAEAALPALDIPVDLLLMDPPRAGLTPAVHDVLAELLPG
QIAYISCDPATLARDVKRILQRGYHLQSVTPFDLFPHTAHVESVTLMSRV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatgtttgaaataaccttcgaaaaaatggtctcgggtggggattgtatgggt
cgattgcccgatggccgcgcgctctttgtgccttttgtgttgccgggggaaaccgtccgc
gtagcagtggtggacgagaagaaacgctatgcccgggggtggccggttgaggttttatct
ccctcaccggagcggattgccccgcgctgtattcattttggtgagtgtggcggatgccag
tatcagcacctggattatgaatcccaattgcgcttgaaagaagctttattgcgcgaccag
tttcagcgcattgcaaatttggaaaatccaccgatccagccgatggtgcccgcgcccaac
ccctggaactaccgcaatcatgttcagtttcatctcagccaggcgggtgagctggggttt
gtgcatgcggatggcgagcacctgctggtgattgaagaatgtcatttgccacaaacgggg
atcaatacgctctggcctcaacttgattttggcgctgaatcaggcgtatatcgcctgggg
gtgcgccagaacagctttgaagacatcatgctaattttggaaggtgatgatccacaagcg
cccgaatttagcgaggatatcccggtctcggcggtgtatacaccgccggaggcacgctta
accgtcctggcaggggatgatcaccaggtgtttaccctgctcgggcgacatttccaggtg
tctgcccgttcttttttccaggtgaacacgcccatggcagagaaaatgatcacgtacctg
ctggaaaatatatccatgacacaatacatgcaagccgttgagctatatgccggcgtgggc
gcgttcagcgcgtttattgcgcccagggttggacatctcactgcaattgagaactcaggc
agcgcctgccatgattttgcggtcaacctggatgaatttgacaacgtgagcctgtatgaa
gccgaggctgaagcggcactgccggcgctggacataccggttgacctgttgctgatggat
ccgccgcgcgccgggctgacaccggcagtccacgatgtgctggctgagctgctgcctgga
cagattgcctacatctcctgtgacccagccaccctggcacgcgacgttaaacgtattctt
caacgtggctatcaccttcaatcggtgaccccttttgacctctttccgcacacagcacac
gtggagagcgtaacattgatgtcacgagtttga
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