KEGG   Brevefilum fermentans: CFX1CAM_2271
Entry
CFX1CAM_2271      CDS       T04881                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
abat  Brevefilum fermentans
Pathway
abat03030  DNA replication
abat03410  Base excision repair
abat03420  Nucleotide excision repair
abat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFX1CAM_2271 (polA)
   03410 Base excision repair
    CFX1CAM_2271 (polA)
   03420 Nucleotide excision repair
    CFX1CAM_2271 (polA)
   03440 Homologous recombination
    CFX1CAM_2271 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abat03032]
    CFX1CAM_2271 (polA)
   03400 DNA repair and recombination proteins [BR:abat03400]
    CFX1CAM_2271 (polA)
Enzymes [BR:abat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CFX1CAM_2271 (polA)
DNA replication proteins [BR:abat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CFX1CAM_2271 (polA)
DNA repair and recombination proteins [BR:abat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CFX1CAM_2271 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFX1CAM_2271 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: SMX55336
UniProt: A0A1Y6K6Y8
LinkDB
Position
I:2548771..2551560
AA seq 929 aa
MPPILYLLDGHGLAYRAYFALTAGGTRSNAFQTNSGEPTAGVYGFTSILMRIFQQENPDY
LAVVFDKGKSFRHEIYEGYKGTRAKMPDDLRGQVERMREIVDAFNIPRLELENYEADDVL
GSVAHWAAEEQGLGVKIITGDKDLLQLVTDRVVVNLAGTKLSEAKDYFPEDVVEKMGVPP
EKVVDLKALSGDPSDNIPGVRGIGEKTAVKLLNEYGSLDGIYEHLDEITGRAKSALEAGR
ESAYMSRELARIVTDLDIKVNLDQARIDHFNPKAVENLFRELEFRSLVEQLNTLVGKMHP
QATRSGQMDLFDQAASNLPASEQPGLVKTTIVDTPERLQELAKVLSGAEQIAFDTETNDT
DPMRARLVGISLAVDPEHGYYIPLGHQQGEQLTIEEVFKALAGAMTDKNIGKVGHNLKFD
YLVLKRAGLTVEPLTFDTMVAEWLINPASRNLGLKNLAWVRLGYEMTRIEELIGKGRGQK
TMDQVPIAEAAGYAAADAAICLRLIPQLRDELGSHNAQKLFDTMEMPLVPVLAGMEEVGF
SLDTAFFKNFSHELEGKLAEIEARIQTAVGYAFNLNSTQQLSEALFNKLGLEPPDRARKT
SSGLYSTAADVLEAMTGQHPVVAWVLEYRELEKLRSTYVDALPLQVNPDTGRVHTSFNQT
GTVTGRIASSNPNLQNIPIRTEIGRRVREGFIAQPGWLLMSVDYSQIELRIVAHMSQDEA
MLAAFRAGQDIHSTTAAAVHGIDLAEVTPEMRRHAKAINFGLIYGMSAFGLTNATDLTLA
EAENFIEAYFKEFPGVKNYLQGIRKQAAQQGYVETLLGRRRYFPNLKSGAPHNIRQREER
EAINAPIQGTAADIIKLAMLRLPVEIKKAGLGVRMLLQVHDELIFEVPEDELQQTVKLVQ
SVMENAYTLSIPIGTEARVGKSWGVMEEV
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcccccaatcctttatttactcgacggtcacggtctggcgtatcgggcgtattttgcc
ctgaccgcaggcggcacccgctccaatgccttccagaccaacagcggtgagcccaccgcg
ggcgtgtatggctttaccagcatcctcatgcgtatctttcaacaggaaaacccggattac
ctggcagtggtttttgataaaggcaagtccttccgtcacgaaatctatgaaggctataaa
ggcacccgggcaaagatgcccgatgacctgcgcgggcaggtcgagcgcatgcgggagatt
gtggacgctttcaacatcccccgcttggagctggagaattacgaagccgatgatgtgctg
ggcagcgtggcacactgggctgccgaagagcaggggctaggcgttaagatcatcactggc
gataaggacttactgcaactggtcaccgaccgggtggtggttaacctggcgggcaccaag
ctctcggaggctaaagattattttccagaagacgtggtggagaaaatgggcgtgccacct
gaaaaggtggttgatttaaaagccctgagcggcgacccctccgataatatccctggcgtg
aggggcatcggtgaaaaaacggctgtaaaactgctgaatgaatacgggtcgttggatggc
atttacgagcacctggacgagatcaccgggcgggctaaatccgccctggaggcgggcagg
gagtccgcctacatgagccgtgaattagcccggatcgttaccgacctggacataaaagtc
aatttagatcaggcacgtattgaccatttcaaccccaaagcggtggagaacctgttccgc
gagctggaattccgcagcctggttgaacaattgaataccctggtggggaaaatgcatccg
caggcgacccggagcggccagatggacttgtttgaccaggccgcatcaaacctgcctgct
tcagagcaacctggattggtgaaaacgacgattgttgatacacccgaaaggctgcaagaa
ctggcaaaggtcctttctggtgctgagcagatcgcctttgataccgagaccaacgatacc
gacccgatgcgcgccaggttggtcggcatttcactggcagttgatcccgagcacggatac
tacatcccactcgggcatcagcagggcgagcagttgaccattgaggaggtttttaaagcc
ctggcaggggcgatgacggacaaaaacatcggcaaagtcggtcacaacctgaaatttgat
tatttagtcctcaagcgcgccggactgaccgtggagccactgacctttgatacgatggtc
gctgaatggctgatcaacccggcttcgcgcaacctgggcttgaagaacctggcttgggtg
cgcctgggctacgaaatgacccggattgaagaactgattggcaaagggcgaggacaaaag
accatggaccaggtgccgatcgctgaggcagccggttacgctgcagcggacgcggccatc
tgcctgcgcttgattccacaactgcgggatgaattgggcagccacaacgcacaaaaactc
tttgataccatggaaatgcccctggtaccggtgctggctggaatggaagaagtcggcttc
agcctcgataccgctttctttaaaaatttttctcacgagttggaaggtaaactggcagag
atcgaagcccggattcaaactgcggtgggatatgcgtttaatttaaactccacccagcag
ctttcagaagccctgtttaataagctcgggcttgaaccgcccgatcgggcgcgcaaaaca
agttctggcttgtattccacggcggctgatgttttagaggcgatgaccgggcagcatccc
gtggtggcctgggtattggaataccgcgaactggaaaaattgcgttccacctatgtggat
gcattgcccttgcaggtcaaccccgataccgggcgcgtgcatacctcgtttaaccagacg
ggcaccgtcaccgggcggattgcctcttccaaccccaacctgcaaaacatccccattcgg
actgaaatcggtcgaagggtgcgggaaggttttattgcccaaccgggctggttgttaatg
tcggtggattattcgcaaattgagctgcgcatcgtggctcacatgtcgcaggatgaagcc
atgctggctgcctttagagccgggcaggatatccactccaccacggcggcagccgtccac
gggatcgacctggcggaagtcacgcctgaaatgcgccgacatgccaaggcgatcaacttc
ggcctgatctatgggatgagcgccttcgggctgaccaacgccaccgatctgaccctggct
gaagccgaaaattttatcgaagcctattttaaggaattcccgggggtcaaaaattacttg
cagggcatccgtaagcaggctgcgcagcagggctatgttgagaccctcttgggtcgccgc
cggtacttccccaacctgaaaagcggtgcgccgcacaacatccgccagcgcgaggaacgc
gaagcgatcaatgcccccatccagggcacggcagcagacatcatcaaactggcgatgctc
aggcttccggtcgagatcaaaaaagccggcctgggagtgcgcatgctgctgcaggtgcac
gacgagttgatcttcgaagtgcccgaggacgaactgcagcaaacggtgaaactggtgcag
tcagtgatggaaaacgcctacaccttatccattcccatcggtaccgaagccagggttgga
aaaagctggggtgtgatggaggaagtctga

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