Acinetobacter baumannii AB030: IX87_04615
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Entry
IX87_04615 CDS
T03375
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
abau
Acinetobacter baumannii AB030
Brite
KEGG Orthology (KO) [BR:
abau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abau03019
]
IX87_04615
Enzymes [BR:
abau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IX87_04615
Messenger RNA biogenesis [BR:
abau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IX87_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
NACHT
PhoH
AAA_30
TsaE
SLFN-g3_helicase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AIL77942
UniProt:
A0AAP1FAQ4
LinkDB
All DBs
Position
complement(871270..875127)
Genome browser
AA seq
1285 aa
AA seq
DB search
MLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDL
PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVE
VRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQ
EIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNI
RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN
ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQADQK
HALFREADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVE
LAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKT
NTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQIS
LFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKL
RRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTT
QQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEA
LLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERID
PYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENFTFEASQKV
TGVVVKQYQALVPTKTFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVHMQLGDLVR
QLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINADEFNKLLEQVKKQFLSY
GQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYCQPVDLWQE
YPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLF
SQPMKTKMPISPTRLQKLWDRLGIS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatggtttaaatatagatcaatgggtgatggcaagagatcgttaccgtttaaat
cgtttacgtaaagataaaaaagctaatactgcagagattgaaaaattatttgaacagtct
aatgcaaaagttagacagcgttttgagcgcttaccaaaaatcaaattaaatcaggatctt
cctgtaacccaatatgctgaccgtttaattgaagcgattcaaaagcatcaggtcattatt
gtggctggtgaaacaggttcagggaaaactactcagctccctcaaattgcaatgttagca
gggcgtggcttgactggtatgattggtcatacccagccacgtcgtttagctgcacgtagt
gtgtcgcagcgtattgcagaagaagtcggcgaaaagctcggcgaatcgattggttttaaa
atccgttttaatgaacaaggttcgcaagattcgattgtccggttaatgaccgacggtatt
ttgcttgccgagttaggcaatgaccgcttcttgtctaaatatgacaccatcattattgat
gaggcgcacgagcgctcactcaatatcgattttattatgggctatttaaagcagttactg
ccaaaacgcccagatttaaaagtcatcgtgacttcggcaactttagatgtaaatcgtttt
agtaactactttaataatgcaccaatttttgaagtagaagggcgtagttatccggttgaa
gtgcgttatcgcccaatttcagaaatgaatattggtggtagtgatgacgatgaattcgac
gactttgaagaaaacctgccgcgtgcagtcgtacaagctgtagaagaatgctttgctgat
gccgaggaaaaaggccatccagaacatgcagatattctgattttctcaagtacagagcaa
gaaattcgagaattgcaggaaaccttacaaaagtacgggccgagacataccgaaatttta
cctttgtatgcgcgtttagccgtttctgagcaacaaaagatttttagcccaagtggaaag
ggccgccgtattattattgcgacgaacgttgcagaaactgcactgactgttcctaatatt
cgctacgtgattgatagcggctttgcacgtatatctcgttataactaccgttcacgcgtg
caacgcttaccgattgaggcaatttcacaagctgcagcaaatcaacgtaaagggcgctgt
ggtcgtgttgctccaggtgtatgtattcgtttatatagcgaagaagactttttaagtcgt
cctgagtttaccgaacctgaaattaagcgaactaacttggcatcggttattctgcaaatg
cagagcttaggtttaggtgagctggaaaactttgatttcattgagccgccagatttccgt
ctagtcaatgatggtcgtaagttgctcattgagttaggggcgctgaacgagaagaaaaac
gaactgactaaagtcggccaaatgatggcacgtatgccgattgatccaagacttgcacgt
atgattgtgggtggggctcattttggtgtactcaaagaaattttggtggtggtcagtgca
cttgctgttcaagacccgcgtgaacgtccagcagataaacagatgcaagctgatcaaaag
catgcattgtttcgcgaagcagattcagattttctgttttatttaaaactttgggatact
ttaaatcctaaaggcgaagcaggaatgtcggaaaacaagcgtcgtcaatttgctaagcag
catttcttaagctggttacggttacgtgaatggaaacagacacaccagcagctggttgag
ctggccgaaggtttaaaacttagttttaatgaaaagcctgcaaattatgaaaacttgcac
cgtgcgttgctgaccggtttattatcgttcattgccaataaaactgatgaacgtaatacc
tttatggcagtgcgtcagcaaaaggctaaagtttttccggccagtactttgcataaaacc
aatactgcgtgggtgatggcttttgagatggtggaaacctctcaggtctatttacgtaca
ttagcaaaaattgatcctgaatggattttgcttgctgcacgcgacttattgaaatatcac
tatttcgagccgcattggtctaaaaaagccggtattgtaaatgcttatgcacaaatttca
ttgtttggtttaattattgaaccgaagcgtttggttaattttgagaaagttgaccaacct
gctgcacatgagattttcttacgtgatgcattaaccacaggaaatctgggtacagttcca
ccatttttaaaacataacttgcttaaacttgaagaagtagagcgagttgaagataaatta
cgtcgccgcgatttggtggttgatgaagaaacgatttatcagttctatgcgtcgaaaatt
cctgaagaaattgcgagtcgtcgtagttttgaagactggcgtgcaaccgtagaagcaaaa
aatccgcgttatttatacgtggaagatgatgcgctttggctcaatgaccgtccgaccacg
cagcaattccctgatcatttacataatggtcagttacgcttggcaactacttatcgcttt
gacccaagtcatgatgaagatggcgcaacggtccaaattccggtacaggcattgccacag
gtagatgaaaatatttggtcgtgggggattccaggctggcgtttagatctcattgaagcc
ttattgaaagccttaccaaaagataaacgtcgtaacctcgtaccaattccagatacggcg
cgtaagctaatgcaaggtattgatgctgtacatttgcgacaacatatctttagctatctg
gcgtttgctttacgtggtgagcagattacggaaaaagatttttcatttgaacgcatagat
ccgtatttggtgccttttattaaggtgattgatgaaaaaggtaaattgatcgccaaaggc
cgtgacttggctgagttgaaggctcgttgtcgcgtagaaacgcatcgtccggtgaaacag
caaaaaggtgaatttaaaaccttccctgaaaactttacctttgaagcttcacagaaggtg
acaggtgttgttgttaaacaatatcaagctttagtgccaactaaaacttttgccgaactt
gaggcgaaagatgagtctggcgtggttatacaaacatttaacgatcaggcagaggcgatt
aaacagcatcgagaaggtattattcgtctggtccatatgcaacttggcgatttggttcgc
cagttgaaaaagcagatttcgaaacctcttgcgttggcttattcacctttaggcgataaa
gctaaacttgagcaaatgctggtatacgcgactttacaaatggcaattacgactttgcca
atcaatgctgatgaatttaataagctgctagaacaggtcaaaaaacaatttttgagctat
gggcagcaagcacttgagcaattaagtgatatttatattcagtggcaacaaatccgtcgt
caacttttagtacttgatccggacgtatttggacgcagtatcgatgatattgaagatcag
ctagatttaatgtcacttggcaattttgtctattgtcagccagttgatctttggcaggaa
tatccacgttatttaaaagcgctgctattgcgtttagatcgattgccaaataatctacag
cgagatcatgctgctattgacgatgtcgatccatggatggacaaggtatttaagttcaaa
aatgatccaagaatcaaagaattgtacttgatgctggaagaattacgtatttctttattt
tctcagccgatgaaaaccaagatgcctatttcgccaactcgactacaaaagttatgggat
cgtttgggaatcagttaa
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