Georhizobium profundi: D5400_00070
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Entry
D5400_00070 CDS
T05798
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
abaw
Georhizobium profundi
Pathway
abaw00300
Lysine biosynthesis
abaw01100
Metabolic pathways
abaw01120
Microbial metabolism in diverse environments
abaw01230
Biosynthesis of amino acids
Module
abaw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D5400_00070
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
abaw01002
]
D5400_00070
Enzymes [BR:
abaw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
D5400_00070
Peptidases and inhibitors [BR:
abaw01002
]
Metallo peptidases
Family M20
D5400_00070
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF4625
Motif
Other DBs
NCBI-ProteinID:
AZN69878
UniProt:
A0A3S9AYT0
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All DBs
Position
12574..13767
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AA seq
397 aa
AA seq
DB search
MTKETLATDPVANLSALVRCASVTPADGGALGALEAMLVPLGFSVERVTFSDDDTADVEN
LYARLGSAEPHLMFAGHTDVVPPGDVAAWSKPPFEAAIVDDMMIGRGTVDMKGGIAAFVA
ACASYIAENGPPKGSISFLITGDEEGPSINGTEKLLKHADAKGEVWQGAIVGEPTNPEAM
GDMIKIGRRGSLSGIITVHGVQGHVAYPHLADNPIRAIVAFCNALLDTPFDHGTDTFPAT
NLEITSIDVGNPSVNVIPSKATAAFNVRFNDRWDAESLQMDIHNRLDQAAERLRSGTERP
PVDFDITWKERPSPSFLTRDETLIAAMQQAVESVTGRTPKLSTTGGTSDARFIKDYCPVV
EFGLVGQTMHMVDERVALSDLRTLTQIYRQFLDRWFA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagaccctagccacagaccccgtcgccaatctgtcagcgctggtacgctgc
gcctccgtcacgccggcagacggcggagcgctcggcgcgctcgaagccatgctcgttcct
ctcggcttcagtgtcgagcgcgtcaccttcagcgacgacgacacggccgatgtcgagaat
ctttatgcgcgtcttggcagcgcggagccgcatctgatgtttgccggccacacggacgtg
gtgccgcccggcgatgtcgccgcctggtcgaagccgcctttcgaggcagccatcgtcgac
gacatgatgatcgggcgtggcacggtcgacatgaagggtggcattgccgccttcgtggcc
gcctgcgcgagctacatcgccgaaaacggaccgccgaaaggctcgatctctttcctcatc
acgggcgacgaggaaggaccgtcgatcaacggcaccgagaagctcctgaaacatgccgat
gcgaagggcgaagtctggcagggcgcgatcgtgggcgagccgacgaacccggaagccatg
ggcgatatgatcaagatcggccgccggggctcgctgtcgggcatcattaccgttcacggc
gtgcagggtcacgtcgcctacccgcatcttgccgacaacccgatccgcgcgatcgtagcg
ttctgcaatgcgctgctcgacacgccgttcgaccacggcacggatacttttccggctacc
aatctcgaaattacgtcgatcgacgtcggcaatccgtccgtcaacgtgatcccgagcaag
gcaaccgcagctttcaacgtgcgttttaatgatcgctgggacgcggaaagcttgcagatg
gacattcacaacaggctggatcaggcggcggagcgtttgcgcagcggcacggagcggccg
ccggtcgacttcgacatcacctggaaggagcggccgagcccatcgtttctgacacgcgac
gaaacgctgatcgccgccatgcagcaggcggtcgagagcgtgaccgggcggacgccaaag
ctttccacgacgggtggaacgtcggatgcccgcttcatcaaggattactgccccgtcgtc
gaattcggcctggtcggccagaccatgcacatggtcgacgaacgcgtggcgctctccgat
cttcggacgctgacgcagatctaccgccagtttctcgatcgctggttcgcctga
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