Georhizobium profundi: D5400_00625
Help
Entry
D5400_00625 CDS
T05798
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
abaw
Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaw03019
]
D5400_00625 (hrpB)
Enzymes [BR:
abaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D5400_00625 (hrpB)
Messenger RNA biogenesis [BR:
abaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D5400_00625 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
AAA_30
HA2_N
ResIII
AAA_19
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AZN69970
UniProt:
A0A3Q8XL01
LinkDB
All DBs
Position
complement(127717..130188)
Genome browser
AA seq
823 aa
AA seq
DB search
MNRDTFDAAARALPVGAVLNDLATALDRQGAAVLAAPPGAGKTTLVPLRLLDAPWRGDGR
IILLEPRRLAARAAARRMADLLGEEVGDTVGYRMRLDTKISKRTRIEVVTEGVFVRMILD
DPELAGIAAVIFDEFHERALDADFALALTLDVRAALRDDLRLLVMSATLDTDRVSALIDA
PVIESAGRAFPVEMRYRERRAGDRIEDAMADAIRAALGEETGSILAFLPGQAEIRRTAER
LEGRLPQGTVLAPLFGMMDGQAQDRAIRPAAPGERKIVLATSIAETSLTIDGVRVVIDSG
LQRLPHFEPATGITRLETVRVSRASADQRAGRAGRTEPGVAIRLWRAEQTAALPAFTPPE
ILSSDLSGLILDSAAWGVPDPTVLAFIDPPPAPALKEARALLVELGALDPAGGLTAMGRA
IRGLGLPARLAAMVASAPRSSRLDAADIAVLLTEQGLGGSSIDVSERLRRWRSEKGERAS
AARELSRRIVRNLDGAGGTEQKLSTGGLLALAYPDRGARNRGGRGRYLMANGRGAELDPH
DPLAGEEWLVIADLTGRAGAQRIQAAAAIDPGEVEALVETRGVDGDECMFDTDSRSVRAR
HVRRLGAIVLEERAIPVPTDERTAQALADGVRRLGVDALPWSDNGRQLRARLGFLNRSIG
DPWPAVDDDALLAKLEIWFTPYQSGVRAFDRIAAGSLTEGLMALVPYDLHRMIEAEAPTH
FVVPTGSRIPIRYDGDVPVLAVRVQELFGLASHPTIAQGRLPLLLELLSPAHRPIQTTRD
LPGFWAGSWADVRADMRGRYAKHPWPEDPARAEPTRRAKPRGS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgacacattcgatgcggcggcgcgtgctctgccggtcggggcggttcttaac
gaccttgccactgcgctggataggcaaggcgcagcggtcctcgccgcacctccgggtgcc
ggcaagaccacgctcgttccgctcaggcttctcgacgccccctggcggggcgacggtcgg
atcatccttttggaaccacgccgcctggccgcccgcgctgcggcgcgccgcatggcggat
ctgcttggtgaagaagtcggcgatacggtcggctaccgcatgcggctcgacacgaagata
tcgaagcggacgcgcatcgaagtcgtgaccgaaggcgtcttcgtgcgcatgatcctcgat
gatccagaactcgcagggatcgcggcggtcatcttcgatgaattccacgagcgcgcgctc
gatgcggatttcgcccttgctctcaccctcgatgtgcgcgcagcgttgcgcgacgatctg
cgcctgctcgtcatgtcagcgacgctcgataccgaccgcgtctccgccttgatcgatgcg
ccggtgatcgaaagcgccggccgggcctttccggtggagatgcggtatcgcgaacgccgg
gcgggcgaccgcatcgaagatgccatggcagatgcgatccgtgccgcgctcggcgaggag
acaggatcgatcctcgcttttctgcccggccaggcggaaatccgtcgcacggccgagcgg
ctggaaggccggctgccgcaaggcacggtgctggcgccgctcttcggcatgatggatggg
caagcgcaggatcgcgcgatacggccggcagcacctggcgagcggaagatcgtgcttgcg
acctcgattgccgaaacatcgctgacgatcgacggcgtgcgcgtcgttatcgacagcggc
ctgcagcgtctgccgcatttcgaaccggcaacggggatcacgcggctggagactgtgcgg
gtgtcacgcgcgtccgccgatcagcgcgctggacgcgcgggccgcaccgaacccggcgtt
gcgatcaggctttggcgtgccgagcaaaccgccgcgctgccggccttcacgccgccggaa
attctgtcgagcgatctatcgggcctcatccttgacagcgccgcctggggcgtccccgat
ccgacggtgctcgctttcatcgatccaccgccggcgcctgccctcaaggaggcgcgtgcc
ttgctggtggaactgggcgccctcgatcccgccggcggactgaccgccatgggacgcgcg
atccgcgggctcgggcttcccgcccgcctcgcggccatggtggcctccgcgccgcgctcg
agtcgcctcgatgcagccgacatcgccgtgctgctgacggagcaggggctgggcggctcg
tccatcgatgtgtcggagcggcttcgccgttggcgcagcgagaagggagagcgcgcatcc
gccgcacgggaactgtcccgccgcatcgtcagaaatctggacggcgccggagggaccgag
cagaagctttcgacgggcggcctgctggcgcttgcttaccccgatcgtggtgcccgcaac
cgcggtggacgtggccgttatctcatggccaatggccgcggcgccgagctcgatccgcac
gaccctctggcaggggaggaatggctggtgatcgccgatctgaccggccgcgccggtgcc
cagcgcatccaggcagccgctgccatcgatccgggcgaggtggaagcgctggtcgagacg
cgcggcgtcgacggcgacgagtgcatgttcgatacggacagtcgatcggtgcgggcccgc
cacgtccgccgccttggcgccatcgtgctggaagagcgcgcgatcccggtgccgaccgat
gagcgaaccgcgcaagcgctggcagacggcgtgcgccggctcggcgtcgacgcactgcct
tggagcgacaatggccggcagttgcgcgcacgcctcggcttcctcaatcgttcgatcggg
gacccttggccggcggtcgacgacgatgcgctgctggcgaagctggaaatctggttcacg
ccgtaccagtcgggcgtgcgggccttcgatcggatcgcagcgggaagcctgaccgagggt
ctcatggcgcttgtgccctacgacctgcatcgcatgatcgaggcggaggcgccgacccat
ttcgtcgtgccgaccggctcgcgcatcccgatccgctacgatggcgacgtgccggtgctg
gcggtgcgggtgcaggagcttttcgggctcgcgtcccatccgacgattgcgcagggccgc
ctgcctctattgctggaactgctctcgcctgcgcaccgaccgatccagacgacgcgcgat
ctgccgggcttctgggccggctcctgggccgatgttcgtgcggatatgcgcgggcgctat
gccaagcacccatggccggaagatcccgcccgggctgaaccgacgcgcagggcaaaaccg
cgcggttcgtga
DBGET
integrated database retrieval system
