Georhizobium profundi: D5400_01600
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Entry
D5400_01600 CDS
T05798
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5400_01600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abaw03019
]
D5400_01600 (pnp)
03016 Transfer RNA biogenesis [BR:
abaw03016
]
D5400_01600 (pnp)
Enzymes [BR:
abaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D5400_01600 (pnp)
Messenger RNA biogenesis [BR:
abaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D5400_01600 (pnp)
Transfer RNA biogenesis [BR:
abaw03016
]
Prokaryotic type
tRNA degradation factors
D5400_01600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AZN70139
UniProt:
A0A3S9AZM3
LinkDB
All DBs
Position
complement(327657..329780)
Genome browser
AA seq
707 aa
AA seq
DB search
MFDHHKVELEWAGRTLTLETGKVARQADGAVIATYGETVVLATVVSAKEPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLTSRLIDRPIRPLFPDGYKNDTQVIVTVMQH
DLENNPDVVALVATSAALTLSGVPFMGPVGGARIGYINGEYRLNPTVDEMPESKLDLIVA
GTGDAVLMVESEAQELDEETMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPRDFTAEDHSA
LESEMLAFAEAELRDAYKNTDKAARYAAVDAVKAKVKAHFAPAEGEEARYTAEQIGSVFK
SLQAKIVRWNILDTKSRIDGRDLATVRPIVSEVSMLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKERFLLHYNFPPFSVGETGRIGSPGRREIGHGKLAWRAIRPMLPAP
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPIQRPVAGIAMGLIKEDERFAVL
SDILGDEDHLGDMDFKVAGTENGITSLQMDIKIEGITEEIMKIALGQAKDGRIHILGEMA
KALTTSREELGEFAPRIEVMQIPVDKIRDVIGSGGKIIREIVEKTGAKINIEDDGTIKIA
SASGKEIEAAKKWIHSIVDEPEIGHVYEGTVVKIADFGAFVNFFGPRDGLVHISQLAEER
VAKTSDVVKEGQKVYVKLMGFDERGKVRLSMKVVDQETGKEREKQED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatcaccacaaagttgaactcgaatgggccggccgcacgctgaccctcgaaacg
ggcaaggtcgcccgccaggctgatggcgccgtcatcgccacctatggcgagaccgtcgtg
ctcgccaccgtcgtttccgccaaggagccgaagcccggccaggacttcttcccgctgacc
gtcaactaccaggaaaagacctacgccgccggcaagatcccgggtggctacttcaagcgc
gaaggccgtccgtccgaaaacgagacgctcacctcgcgcctcatcgaccggccgatccgc
ccgctctttccggatggctacaagaacgacacccaggtcatcgtcaccgtgatgcagcac
gacctggagaacaatccggacgtcgtcgcgctcgtcgccacctccgctgcgctgacgctt
tcgggcgtgcccttcatgggccccgtcggcggcgcgcgcatcggctacatcaacggtgaa
taccgcctgaacccgaccgtcgacgaaatgccggaatccaagctcgacctgattgtcgcc
ggcacgggtgacgcggttctcatggtggaatcggaagcccaggaactcgacgaagagacg
atgctcggcgccgtcatgttcggccatcgcggcttccagccggtgatcgacgcgatcatc
aagctcgccgaagtggctgccaaggagccgcgcgatttcaccgccgaagatcattcggcg
ctcgaaagcgaaatgctcgccttcgccgaagccgaactccgcgacgcctacaagaacacc
gacaaggccgcacgctacgccgcggtcgatgccgtcaaggccaaggtcaaggcgcatttc
gcgccggccgaaggcgaagaagcccgctacaccgccgagcagatcggctcggtcttcaag
tcgctccaggcaaagatcgtgcgctggaacatcctcgacaccaagtcgcgcatcgacggc
cgtgatctcgccaccgtccgcccgatcgtgtcggaagtctccatgctgccgcgcacacac
ggctccgcactcttcacccgcggcgagacccaggcgatcgtcgtcgccacgctcggcacc
ggcgaagacgagcagtacgtcgattcactcacgggcatgtacaaggagcgcttcctgctc
cactacaacttcccgcccttctccgtcggtgaaacgggccgcatcggctcgcccggccgc
cgcgaaatcggccacggcaagctcgcatggcgcgcgatccgtccgatgctgccggcgccc
gagcagttcccctacacgctgcgcgtcgtctccgagatcaccgaatccaacggctcgtcc
tccatggcgaccgtgtgcggcacctcgctcgcactcatggatgcaggcgtgccgatccag
cgccccgtcgccggcatcgccatgggcctgatcaaggaagacgagcgcttcgccgtgctt
tccgacatcctgggcgatgaagaccacctcggcgacatggacttcaaggtcgcaggtacc
gagaacggcatcacctcgctgcagatggacatcaagatcgaaggcatcaccgaggagatc
atgaagatcgcgctcggccaggccaaggacggtcgcatccacatcctcggcgagatggcc
aaggccctcacgacgagccgcgaagagctgggcgagttcgccccgcgcatcgaagtgatg
cagatccccgtcgacaagatccgtgacgtcatcggttcgggcggcaagatcatccgcgag
atcgtcgaaaagaccggcgccaagatcaacatcgaggatgacggcacgatcaagatcgca
tcggcctccggcaaggagatcgaagccgccaagaagtggatccactccatcgtcgacgag
ccggaaatcggccacgtctacgaaggcacggtcgtgaagatcgccgatttcggcgccttc
gtgaacttcttcggcccgcgcgacggcctcgtccatatctcccagctcgccgaagaacgc
gtcgccaagacatccgacgtcgtcaaggaaggccagaaggtctacgtcaagctcatgggc
ttcgacgaacgcggcaaggtccgcctctccatgaaggtcgtcgaccaggagaccggcaag
gaacgcgaaaagcaggaagactga
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